Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 MTND2P19-201ENST00000449129 1012 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN1Q12860 SUMO2P2-201ENST00000456482 255 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN1Q12860 RNU7-136P-201ENST00000458819 69 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTN1Q12860 FCF1P3-201ENST00000496394 590 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 MTCYBP35-201ENST00000503630 1137 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC110794.1-201ENST00000505816 425 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC093281.2-201ENST00000510153 597 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC010625.1-201ENST00000511296 403 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC022861.1-201ENST00000522981 663 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 MTCYBP41-201ENST00000528913 1123 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTN1Q12860 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC024224.1-201ENST00000538284 609 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 RPL21P12-201ENST00000559810 515 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC004987.4-201ENST00000603383 338 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC005000.2-201ENST00000605468 310 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AL450489.1-201ENST00000612071 468 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC009464.1-201ENST00000615731 469 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AL356321.1-201ENST00000621360 228 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC110801.1-201ENST00000623590 212 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.33□□□□□ -1.88
CNTN1Q12860 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 RPL23AP57-201ENST00000332361 466 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CNTN1Q12860 SNORA4.1-201ENST00000364263 144 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC126124.2-201ENST00000413542 321 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC092447.6-201ENST00000414578 210 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC007390.1-201ENST00000415722 356 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AL590233.1-201ENST00000430017 456 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 HSPE1P28-201ENST00000443139 211 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 ARPC3P5-201ENST00000448802 534 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 snoU109.4-201ENST00000458953 143 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.32□□□□□ -1.88
CNTN1Q12860 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC020893.1-201ENST00000502452 580 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTN1Q12860 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 PCBP2P3-201ENST00000509726 843 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CNTN1Q12860 RNU6-150P-201ENST00000516237 95 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
CNTN1Q12860 HIGD1AP1-201ENST00000550979 275 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AL160281.1-201ENST00000605307 311 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC073657.2-201ENST00000605661 303 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.32□□□□□ -1.88
CNTN1Q12860 AL355493.4-201ENST00000618530 292 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 AC097714.1-201ENST00000511272 1647 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 AC244517.1-201ENST00000606030 2086 ntBASIC3.32□□□□□ -1.88
CNTN1Q12860 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNTN1Q12860 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.31□□□□□ -1.88
CNTN1Q12860 AL356473.1-201ENST00000406203 1408 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 AL022578.1-201ENST00000439330 1433 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 ZNF542P-204ENST00000482727 1305 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 RNU6-931P-201ENST00000363850 107 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.31□□□□□ -1.88
CNTN1Q12860 SNORA48.2-201ENST00000390926 124 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 AC119751.3-201ENST00000399720 670 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 AL031679.1-201ENST00000400616 525 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 AL138880.1-201ENST00000405824 642 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 TPMTP2-201ENST00000414372 726 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.31□□□□□ -1.88
CNTN1Q12860 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.31□□□□□ -1.88
CNTN1Q12860 RPL7P30-201ENST00000420888 709 ntBASIC3.31□□□□□ -1.88
CNTN1Q12860 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.31□□□□□ -1.88
CNTN1Q12860 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.31□□□□□ -1.88
CNTN1Q12860 AC007742.1-201ENST00000425789 329 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms