Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.7□□□□□ -2.14
TFF3Q07654 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.7□□□□□ -2.14
TFF3Q07654 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.7□□□□□ -2.14
TFF3Q07654 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.7□□□□□ -2.14
TFF3Q07654 AC243772.1-201ENST00000451620 410 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.7□□□□□ -2.14
TFF3Q07654 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.7□□□□□ -2.14
TFF3Q07654 AC012181.1-201ENST00000479895 423 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AC023424.2-201ENST00000493479 777 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 RPL23AP63-201ENST00000498752 471 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AC108729.3-201ENST00000513484 108 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 RNU6-1053P-201ENST00000515930 101 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.7□□□□□ -2.14
TFF3Q07654 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.7□□□□□ -2.14
TFF3Q07654 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.7□□□□□ -2.14
TFF3Q07654 MIR3683-201ENST00000580847 82 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AL121917.1-203ENST00000605534 577 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.7□□□□□ -2.14
TFF3Q07654 AC244517.12-201ENST00000623581 663 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
TFF3Q07654 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TFF3Q07654 RNA5SP167-201ENST00000365461 116 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TFF3Q07654 EI24P1-201ENST00000416584 867 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.69□□□□□ -2.14
TFF3Q07654 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 NDUFB4P6-201ENST00000436819 366 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 USP9YP8-201ENST00000441913 500 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.69□□□□□ -2.14
TFF3Q07654 AC079804.2-201ENST00000490376 200 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 RNA5SP364-201ENST00000516938 78 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.69□□□□□ -2.14
TFF3Q07654 AP000790.1-201ENST00000528891 737 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC007115.1-201ENST00000546853 234 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC121758.2-201ENST00000553271 193 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC010735.1-201ENST00000567305 1026 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.69□□□□□ -2.14
TFF3Q07654 OR4K7P-201ENST00000580232 945 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC023043.2-201ENST00000589678 1026 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC091057.2-201ENST00000602594 792 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 AC009314.1-201ENST00000603871 304 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 MIR6895-201ENST00000613497 78 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 MTND5P23-201ENST00000430812 1655 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TFF3Q07654 MAPK10-266ENST00000641066 6555 ntBASIC1.69□□□□□ -2.14
TFF3Q07654 XKRY2-202ENST00000623874 1581 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 XKRY-202ENST00000624960 1581 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.68□□□□□ -2.14
TFF3Q07654 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
TFF3Q07654 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
TFF3Q07654 RNU6-1320P-201ENST00000390838 107 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 RNU6-1269P-201ENST00000391139 107 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 MTCO3P30-201ENST00000426425 670 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.68□□□□□ -2.14
TFF3Q07654 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.68□□□□□ -2.14
TFF3Q07654 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 XKRYP6-201ENST00000440468 1116 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 XKRYP3-201ENST00000442113 1116 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 HMGB3P21-201ENST00000452483 547 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.68□□□□□ -2.14
TFF3Q07654 RNU6-599P-201ENST00000459383 107 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 RNU6-1193P-201ENST00000459461 107 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 MTAPP1-201ENST00000489154 819 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC104564.1-201ENST00000493028 407 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.68□□□□□ -2.14
TFF3Q07654 RPS3AP23-202ENST00000574601 686 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.68□□□□□ -2.14
TFF3Q07654 PSMA6P4-201ENST00000603247 718 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC113368.1-201ENST00000603736 382 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 SNRPGP19-201ENST00000603826 189 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 snoU13.31-201ENST00000607291 104 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC010678.1-201ENST00000614118 713 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC091834.1-201ENST00000614543 472 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AC108479.2-201ENST00000617314 601 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.68□□□□□ -2.14
TFF3Q07654 RNU6-368P-201ENST00000620928 107 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 RNU6-538P-201ENST00000622329 107 ntBASIC1.68□□□□□ -2.14
TFF3Q07654 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
TFF3Q07654 DCAF13P1-201ENST00000495256 1330 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.67□□□□□ -2.14
TFF3Q07654 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.67□□□□□ -2.14
TFF3Q07654 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TFF3Q07654 Y_RNA.226-201ENST00000364337 114 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 SET-203ENST00000372688 801 ntTSL 2 BASIC1.67□□□□□ -2.14
TFF3Q07654 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.67□□□□□ -2.14
TFF3Q07654 RNU6-146P-201ENST00000384602 108 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.67□□□□□ -2.14
TFF3Q07654 MTND4LP13-201ENST00000425022 298 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.67□□□□□ -2.14
TFF3Q07654 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.67□□□□□ -2.14
TFF3Q07654 NAMPTP2-201ENST00000505629 1115 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.67□□□□□ -2.14
TFF3Q07654 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 AC025755.1-201ENST00000521306 278 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.67□□□□□ -2.14
TFF3Q07654 OR4R1P-201ENST00000529879 463 ntBASIC1.67□□□□□ -2.14
TFF3Q07654 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.67□□□□□ -2.14
TFF3Q07654 VN1R84P-201ENST00000593697 235 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms