Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 OR4K8P-201ENST00000578842 1048 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 MIR4307-201ENST00000582802 84 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 MIR3922-201ENST00000585192 84 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3AQ05086 BCRP9-201ENST00000605312 388 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 AC092354.1-201ENST00000606057 376 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3AQ05086 AL031666.3-201ENST00000609320 1006 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3AQ05086 ZNF962P-201ENST00000443465 3140 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3AQ05086 CR381670.1-201ENST00000624291 1693 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3AQ05086 PABPC1P9-201ENST00000426076 1612 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3AQ05086 PRO1804-201ENST00000623780 2050 ntBASIC4.06□□□□□ -1.76
UBE3AQ05086 MTCO1P9-201ENST00000505577 1534 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3AQ05086 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3AQ05086 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3AQ05086 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3AQ05086 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
UBE3AQ05086 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 RNVU1-14-201ENST00000384770 164 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AL021407.1-201ENST00000404531 386 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 CCDC58P2-201ENST00000417131 366 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC079780.1-201ENST00000428259 207 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 RPL37P21-201ENST00000435890 276 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 UBE2V1P13-201ENST00000436983 439 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 ISCA1P2-201ENST00000438679 421 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC092641.1-201ENST00000440229 772 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3AQ05086 FAM103A2P-201ENST00000444122 354 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 MTND2P22-201ENST00000444325 1033 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 RPL7P36-201ENST00000444633 681 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC010655.1-201ENST00000449336 292 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 snoU13.4-201ENST00000458916 104 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 MLLT10P2-201ENST00000506434 249 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 KLHL2P1-201ENST00000508691 521 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC103783.1-201ENST00000520506 373 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC022695.1-201ENST00000522089 237 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AP003497.1-201ENST00000528472 562 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 RPL21P12-201ENST00000559810 515 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3AQ05086 AL031985.2-201ENST00000600955 480 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC091965.4-201ENST00000607691 587 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AC004908.3-201ENST00000610248 625 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 AL353748.2-201ENST00000622148 471 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE3AQ05086 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3AQ05086 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3AQ05086 AC095050.2-201ENST00000510748 1458 ntBASIC4.05□□□□□ -1.76
UBE3AQ05086 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3AQ05086 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3AQ05086 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3AQ05086 FRG1BP-201ENST00000278882 761 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 Y_RNA.97-201ENST00000363094 102 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 MIR135A2-201ENST00000384854 100 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 MT-TH-201ENST00000387441 69 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 U3.20-201ENST00000390909 217 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3AQ05086 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3AQ05086 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE3AQ05086 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3AQ05086 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3AQ05086 Z83846.1-201ENST00000446798 265 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3AQ05086 RPS27AP8-201ENST00000452665 445 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC073387.1-201ENST00000453261 709 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3AQ05086 AC109486.1-201ENST00000486833 374 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3AQ05086 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3AQ05086 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3AQ05086 AC116347.2-201ENST00000514912 523 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 RN7SKP244-201ENST00000516513 307 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 RNA5SP309-201ENST00000516670 106 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE3AQ05086 CBX3P5-201ENST00000552017 521 ntBASIC4.04□□□□□ -1.76
UBE3AQ05086 AC037471.2-201ENST00000564941 598 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms