Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC091931.1-201ENST00000623488 728 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK3Q00526 AC244258.1-201ENST00000637553 1071 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK3Q00526 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.84
CDK3Q00526 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK3Q00526 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDK3Q00526 CR383658.2-201ENST00000547576 1525 ntBASIC3.53□□□□□ -1.84
CDK3Q00526 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.53□□□□□ -1.84
CDK3Q00526 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.53□□□□□ -1.85
CDK3Q00526 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
CDK3Q00526 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CDK3Q00526 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK3Q00526 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 SNORA31-201ENST00000362607 130 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 RNU6-1155P-201ENST00000363554 107 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 RNU1-89P-201ENST00000384592 164 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDK3Q00526 MIR1305-201ENST00000408300 86 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK3Q00526 AC068533.1-201ENST00000418542 415 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC079780.1-201ENST00000428259 207 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 OR6K1P-201ENST00000456766 971 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 RN7SL293P-201ENST00000481765 281 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC106872.2-201ENST00000494303 480 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC092045.1-201ENST00000495716 1231 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC004062.1-201ENST00000509926 645 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK3Q00526 OR5D17P-201ENST00000531492 978 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC034268.2-201ENST00000571784 482 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 MIR3915-201ENST00000578518 97 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 OR4K8P-201ENST00000578842 1048 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK3Q00526 WISP1-OT1-201ENST00000602893 642 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC069200.1-201ENST00000609511 323 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AL590282.1-201ENST00000610379 1136 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC008443.7-201ENST00000622195 246 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC127502.3-201ENST00000636170 1206 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 AC006927.3-201ENST00000638789 384 ntBASIC3.52□□□□□ -1.85
CDK3Q00526 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK3Q00526 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK3Q00526 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK3Q00526 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK3Q00526 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK3Q00526 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK3Q00526 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK3Q00526 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK3Q00526 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK3Q00526 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK3Q00526 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK3Q00526 SNORA63.1-201ENST00000362493 131 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 MIR183-201ENST00000384958 110 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 CRYBB2P1-203ENST00000415709 538 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC009518.2-201ENST00000418056 731 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 RPL21P66-201ENST00000426566 466 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AL445669.1-201ENST00000426743 755 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 ATP5JP1-201ENST00000431631 322 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC091862.1-201ENST00000438016 1100 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 UBE2D3P4-201ENST00000441973 436 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC097262.1-201ENST00000452559 548 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 MTND3P7-201ENST00000474435 343 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 RPL31P13-201ENST00000484151 370 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC034222.1-201ENST00000494052 532 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC096751.1-202ENST00000502691 1067 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC021678.1-201ENST00000505195 936 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC010486.3-201ENST00000511602 785 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 FTH1P9-201ENST00000513251 355 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC008489.1-201ENST00000524271 483 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK3Q00526 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 AC011451.2-201ENST00000604303 598 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 AC121247.2-201ENST00000604776 136 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK3Q00526 TUG1_1.1-201ENST00000610654 145 ntBASIC3.51□□□□□ -1.85
CDK3Q00526 MIR7844-201ENST00000616161 122 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms