Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDLBPQ00341 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDLBPQ00341 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HDLBPQ00341 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDLBPQ00341 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDLBPQ00341 CASC19-280ENST00000642102 1351 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDLBPQ00341 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HDLBPQ00341 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.43□□□□□ -1.54
HDLBPQ00341 RNY3P3-201ENST00000363816 102 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 U3.15-201ENST00000365398 212 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 RNA5SP366-201ENST00000365454 123 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 RNU6-641P-201ENST00000384006 107 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 RNU6-908P-201ENST00000410160 94 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.43□□□□□ -1.54
HDLBPQ00341 RPL21P24-201ENST00000413752 448 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC138393.2-201ENST00000414742 246 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 OR51A5P-201ENST00000415429 942 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC012498.1-201ENST00000424037 437 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.43□□□□□ -1.54
HDLBPQ00341 AC016691.1-201ENST00000441321 413 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 NUTF2P3-201ENST00000448540 384 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AL162389.1-201ENST00000449233 177 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.43□□□□□ -1.54
HDLBPQ00341 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HDLBPQ00341 AC069439.1-201ENST00000494739 167 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 RNA5SP249-201ENST00000516127 99 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 SNORD27.1-201ENST00000516319 72 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.43□□□□□ -1.54
HDLBPQ00341 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.43□□□□□ -1.54
HDLBPQ00341 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.43□□□□□ -1.54
HDLBPQ00341 AC034105.3-201ENST00000565294 442 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC091979.2-201ENST00000607514 214 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDLBPQ00341 AC063943.3-201ENST00000615562 356 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HDLBPQ00341 SNHG22-203ENST00000617833 660 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC015914.2-201ENST00000618167 288 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AC092794.2-201ENST00000620933 563 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AL136313.1-201ENST00000624804 202 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 AP001273.1-201ENST00000624493 3152 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HDLBPQ00341 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.43□□□□□ -1.54
HDLBPQ00341 MAPK10-349ENST00000641767 3661 ntBASIC5.43□□□□□ -1.54
HDLBPQ00341 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.42□□□□□ -1.54
HDLBPQ00341 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDLBPQ00341 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDLBPQ00341 SNORA72.1-201ENST00000363485 129 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 RNU6-39P-201ENST00000384344 107 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 MIR135A2-201ENST00000384854 100 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 RNU6-1158P-201ENST00000391167 107 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 SNORA57.1-201ENST00000391227 145 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 RNU2-39P-201ENST00000410604 198 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AC009237.5-201ENST00000414271 501 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.42□□□□□ -1.54
HDLBPQ00341 PHBP16-201ENST00000446318 950 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 SNRPGP6-201ENST00000451124 220 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.42□□□□□ -1.54
HDLBPQ00341 AC126389.1-201ENST00000477436 290 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.42□□□□□ -1.54
HDLBPQ00341 AC117522.1-201ENST00000509821 380 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AC105417.1-201ENST00000514691 285 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 Y_RNA.702-201ENST00000516843 96 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.42□□□□□ -1.54
HDLBPQ00341 HMGB1P41-201ENST00000520234 440 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AP003730.1-201ENST00000524605 285 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AF235103.2-201ENST00000525753 346 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 CYCSP29-201ENST00000533731 318 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.42□□□□□ -1.54
HDLBPQ00341 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.42□□□□□ -1.54
HDLBPQ00341 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.42□□□□□ -1.54
HDLBPQ00341 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
HDLBPQ00341 AC010680.3-201ENST00000604215 520 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AL049634.3-201ENST00000604968 457 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.42□□□□□ -1.54
HDLBPQ00341 AL031666.3-201ENST00000609320 1006 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 DISC2.1-201ENST00000612827 205 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 TUG1_2.1-201ENST00000614234 87 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 MIR3653-201ENST00000625572 110 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HDLBPQ00341 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HDLBPQ00341 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDLBPQ00341 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.42□□□□□ -1.54
HDLBPQ00341 GABPAP-201ENST00000419271 1356 ntBASIC5.42□□□□□ -1.54
HDLBPQ00341 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDLBPQ00341 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HDLBPQ00341 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDLBPQ00341 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.41□□□□□ -1.54
HDLBPQ00341 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDLBPQ00341 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms