Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.92□□□□□ -1.78
RAE1P78406 RNA5SP337-201ENST00000517007 109 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RNU4-60P-201ENST00000517239 135 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC022616.3-201ENST00000523940 148 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.92□□□□□ -1.78
RAE1P78406 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
RAE1P78406 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.92□□□□□ -1.78
RAE1P78406 OR4T1P-201ENST00000554933 911 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.92□□□□□ -1.78
RAE1P78406 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.92□□□□□ -1.78
RAE1P78406 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.92□□□□□ -1.78
RAE1P78406 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.92□□□□□ -1.78
RAE1P78406 AC007363.1-201ENST00000604736 620 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RNA5SP108-201ENST00000605921 117 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AP002360.4-201ENST00000606980 481 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC017083.3-201ENST00000609955 700 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AL161637.1-201ENST00000622380 412 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC006065.5-201ENST00000623427 349 ntBASIC3.92□□□□□ -1.78
RAE1P78406 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.92□□□□□ -1.78
RAE1P78406 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RAE1P78406 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RAE1P78406 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RAE1P78406 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RAE1P78406 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RAE1P78406 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.91□□□□□ -1.78
RAE1P78406 RNY4P14-201ENST00000363656 96 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RNA5SP513-201ENST00000364648 118 ntBASIC3.91□□□□□ -1.78
RAE1P78406 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RAE1P78406 Y_RNA.402-201ENST00000383972 102 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RNU6-780P-201ENST00000391030 104 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RNU6-837P-201ENST00000391056 108 ntBASIC3.91□□□□□ -1.78
RAE1P78406 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.91□□□□□ -1.78
RAE1P78406 SNORA3C-201ENST00000408792 125 ntBASIC3.91□□□□□ -1.78
RAE1P78406 Y_RNA.604-201ENST00000410574 102 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RNU2-47P-201ENST00000410649 186 ntBASIC3.91□□□□□ -1.78
RAE1P78406 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 AC022028.1-201ENST00000412054 408 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RPL23AP26-201ENST00000412728 464 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 ELOCP4-201ENST00000420090 333 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC137499.1-201ENST00000427602 88 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC093156.1-201ENST00000440382 670 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.91□□□□□ -1.78
RAE1P78406 RPS4XP4-201ENST00000443195 763 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC010655.1-201ENST00000449336 292 ntBASIC3.91□□□□□ -1.78
RAE1P78406 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.91□□□□□ -1.78
RAE1P78406 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.91□□□□□ -1.78
RAE1P78406 AC091167.1-201ENST00000492017 396 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC023194.1-201ENST00000493084 308 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RPL31P61-201ENST00000496160 376 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC020893.1-201ENST00000502452 580 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC116353.2-201ENST00000505332 712 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC021146.1-201ENST00000511202 716 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC105914.1-201ENST00000511798 226 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 DEFB109D-201ENST00000529497 240 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.91□□□□□ -1.78
RAE1P78406 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 AL512310.1-201ENST00000548639 172 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AL157687.1-201ENST00000554853 619 ntBASIC3.91□□□□□ -1.78
RAE1P78406 RPS3AP4-201ENST00000555161 764 ntBASIC3.91□□□□□ -1.78
RAE1P78406 SUB1P2-201ENST00000556401 297 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC068135.2-201ENST00000569293 1028 ntBASIC3.91□□□□□ -1.78
RAE1P78406 MTCO3P24-201ENST00000572729 782 ntBASIC3.91□□□□□ -1.78
RAE1P78406 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.91□□□□□ -1.78
RAE1P78406 AP001429.1-201ENST00000602568 530 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC006254.3-201ENST00000603353 884 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AL031176.1-201ENST00000604554 466 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC008277.2-201ENST00000605196 797 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC007038.2-201ENST00000608095 740 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC104458.1-201ENST00000608243 463 ntBASIC3.91□□□□□ -1.78
RAE1P78406 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RAE1P78406 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.91□□□□□ -1.78
RAE1P78406 AL773545.4-201ENST00000637262 310 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC244258.1-201ENST00000637553 1071 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AL513478.4-201ENST00000641636 310 ntBASIC3.91□□□□□ -1.78
RAE1P78406 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
RAE1P78406 AC090337.1-201ENST00000579651 2074 ntBASIC3.91□□□□□ -1.78
RAE1P78406 AC244517.1-201ENST00000606030 2086 ntBASIC3.91□□□□□ -1.78
RAE1P78406 Z82217.1-201ENST00000625157 8149 ntBASIC3.91□□□□□ -1.78
RAE1P78406 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
RAE1P78406 MTND5P3-201ENST00000438536 1800 ntBASIC3.91□□□□□ -1.78
RAE1P78406 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAE1P78406 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAE1P78406 LARP1BP1-201ENST00000506036 1359 ntBASIC3.9□□□□□ -1.78
RAE1P78406 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RAE1P78406 AC007390.2-201ENST00000606229 3803 ntBASIC3.9□□□□□ -1.78
RAE1P78406 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAE1P78406 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
RAE1P78406 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAE1P78406 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms