Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA4P78363 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.84□□□□□ -2.11
ABCA4P78363 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA4P78363 MIR3670-2-201ENST00000582974 65 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 MIR3670-1-201ENST00000584160 65 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 MIR3670-3-201ENST00000584855 65 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ABCA4P78363 AP003117.1-201ENST00000602771 554 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 MIR3670-4-201ENST00000612260 65 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 AL356266.1-201ENST00000623311 483 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.84□□□□□ -2.11
ABCA4P78363 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
ABCA4P78363 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.84□□□□□ -2.12
ABCA4P78363 RNA5SP181-201ENST00000410246 98 ntBASIC1.84□□□□□ -2.12
ABCA4P78363 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.84□□□□□ -2.12
ABCA4P78363 AC244098.2-201ENST00000422068 99 ntBASIC1.84□□□□□ -2.12
ABCA4P78363 RPS7P5-201ENST00000441482 581 ntBASIC1.84□□□□□ -2.12
ABCA4P78363 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.84□□□□□ -2.12
ABCA4P78363 AC068339.2-201ENST00000534395 618 ntBASIC1.84□□□□□ -2.12
ABCA4P78363 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.84□□□□□ -2.12
ABCA4P78363 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.84□□□□□ -2.12
ABCA4P78363 AC005951.1-201ENST00000576706 485 ntBASIC1.84□□□□□ -2.12
ABCA4P78363 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.84□□□□□ -2.12
ABCA4P78363 AC005539.1-201ENST00000443768 1479 ntBASIC1.84□□□□□ -2.12
ABCA4P78363 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
ABCA4P78363 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
ABCA4P78363 AC241520.1-201ENST00000422654 1099 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.83□□□□□ -2.12
ABCA4P78363 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.83□□□□□ -2.12
ABCA4P78363 RPL23AP16-201ENST00000441715 421 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 RPL5P13-201ENST00000462840 709 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA4P78363 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA4P78363 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.83□□□□□ -2.12
ABCA4P78363 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 CU459211.1-201ENST00000635667 749 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ABCA4P78363 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA4P78363 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.83□□□□□ -2.12
ABCA4P78363 Y_RNA.116-201ENST00000363292 103 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 RNU6-1251P-201ENST00000364502 107 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ABCA4P78363 MIR607-201ENST00000385241 96 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AC013404.1-201ENST00000413068 249 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA4P78363 AC104332.2-201ENST00000429959 156 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA4P78363 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.83□□□□□ -2.12
ABCA4P78363 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA4P78363 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.6-201ENST00000603753 252 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.11-201ENST00000604059 253 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.10-201ENST00000604330 253 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AC008162.1-201ENST00000604718 254 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.1-201ENST00000604752 252 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.2-201ENST00000604983 252 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.5-201ENST00000605253 252 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.4-201ENST00000605279 254 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.12-201ENST00000605291 253 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.8-201ENST00000605353 252 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.9-201ENST00000605428 253 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL670379.7-201ENST00000605823 252 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 YWHAEP7-203ENST00000622054 312 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AL160394.1-201ENST00000624765 724 ntBASIC1.83□□□□□ -2.12
ABCA4P78363 AC008432.1-201ENST00000615912 1320 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC004925.1-201ENST00000624256 2706 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA4P78363 SNORA48.3-201ENST00000391081 134 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 SNORA26.7-201ENST00000391288 122 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 RPL23AP47-201ENST00000408017 460 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 RNU2-17P-201ENST00000410290 190 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 RPL23AP39-201ENST00000415533 405 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.82□□□□□ -2.12
ABCA4P78363 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.82□□□□□ -2.12
ABCA4P78363 YWHAZP7-201ENST00000436906 631 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 HMGB1P38-201ENST00000490557 577 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC034268.2-201ENST00000571784 482 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.82□□□□□ -2.12
ABCA4P78363 AC245128.3-201ENST00000594721 748 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC010297.1-201ENST00000623948 149 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA4P78363 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA4P78363 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA4P78363 MIR6073-201ENST00000352083 89 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 MIR499A-201ENST00000384903 122 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.82□□□□□ -2.12
ABCA4P78363 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 RNU6-321P-201ENST00000410912 106 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 HSPE1P1-201ENST00000421494 318 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.82□□□□□ -2.12
ABCA4P78363 AC023347.2-201ENST00000433994 462 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA4P78363 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.82□□□□□ -2.12
ABCA4P78363 ARL5AP2-201ENST00000444698 533 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC055855.1-201ENST00000489563 579 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 RPL38P4-201ENST00000502376 214 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AP001029.3-201ENST00000588063 596 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AC069304.3-201ENST00000603938 1084 ntBASIC1.82□□□□□ -2.12
ABCA4P78363 AP004372.1-201ENST00000604842 844 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms