Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RPL7P52-201ENST00000449200 742 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.92□□□□□ -1.62
HERVK_113P62684 UBDP1-202ENST00000457888 382 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AC022364.2-201ENST00000457963 554 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 RNU6-420P-201ENST00000458780 107 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 RPS29P25-201ENST00000481709 171 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 HMGN1P12-201ENST00000499125 195 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 OR5H5P-201ENST00000503164 928 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 FTH1P21-201ENST00000512179 511 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 CENPUP1-201ENST00000526649 1202 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AP000907.2-201ENST00000530827 353 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 GLYCAM1-201ENST00000546596 285 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AC123904.3-201ENST00000547218 814 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 CBX3P5-201ENST00000552017 521 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC016727.1-205ENST00000605437 569 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AP001330.5-201ENST00000607176 411 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AL391813.2-201ENST00000609113 322 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC007546.2-201ENST00000623996 360 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 AC112200.1-201ENST00000625015 234 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC097714.1-201ENST00000511272 1647 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 NMD3P1-201ENST00000439704 1488 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERVK_113P62684 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.92□□□□□ -1.62
HERVK_113P62684 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERVK_113P62684 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERVK_113P62684 ELL2P4-201ENST00000446870 1376 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERVK_113P62684 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERVK_113P62684 RNU6-1322P-201ENST00000364309 107 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 RNU6-1207P-201ENST00000384343 107 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 MIR23A-201ENST00000385245 73 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 RNU11-4P-201ENST00000391149 133 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 MTATP6P18-201ENST00000417994 673 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 EIF1P3-201ENST00000423841 334 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC007283.2-201ENST00000424739 197 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 PSMA6P3-201ENST00000428242 164 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.91□□□□□ -1.62
HERVK_113P62684 CEACAMP1-201ENST00000434624 1035 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.91□□□□□ -1.62
HERVK_113P62684 GEMIN8P3-201ENST00000445417 720 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 PMCHL2-203ENST00000457791 237 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC146944.2-203ENST00000502493 354 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.91□□□□□ -1.62
HERVK_113P62684 MTND3P22-201ENST00000510932 243 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC139495.1-202ENST00000513164 354 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.91□□□□□ -1.62
HERVK_113P62684 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.91□□□□□ -1.62
HERVK_113P62684 AC008694.2-201ENST00000517591 306 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.91□□□□□ -1.62
HERVK_113P62684 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.91□□□□□ -1.62
HERVK_113P62684 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.91□□□□□ -1.62
HERVK_113P62684 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC034105.3-201ENST00000565294 442 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AL356432.3-201ENST00000568952 465 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 MTND6P33-201ENST00000571794 183 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 MIR3167-201ENST00000579623 85 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.91□□□□□ -1.62
HERVK_113P62684 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.91□□□□□ -1.62
HERVK_113P62684 AL117336.2-201ENST00000602435 335 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 Z98200.1-201ENST00000607298 470 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 MIR6864-201ENST00000617935 70 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HERVK_113P62684 AP003122.6-201ENST00000623831 495 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 AP003400.5-201ENST00000624827 617 ntBASIC4.91□□□□□ -1.62
HERVK_113P62684 FER-210ENST00000628534 558 ntTSL 5 BASIC4.91□□□□□ -1.62
HERVK_113P62684 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.91□□□□□ -1.62
HERVK_113P62684 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
HERVK_113P62684 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERVK_113P62684 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
HERVK_113P62684 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HERVK_113P62684 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERVK_113P62684 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.9□□□□□ -1.62
HERVK_113P62684 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HERVK_113P62684 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HERVK_113P62684 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HERVK_113P62684 RNY1P12-201ENST00000364251 105 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 SNORD82-201ENST00000365530 70 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 RNU6-878P-201ENST00000384578 110 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC068050.1-201ENST00000394891 380 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 RPS15AP12-201ENST00000419498 388 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AL513185.2-201ENST00000425543 193 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC006548.1-201ENST00000427470 102 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 GTF2IP20-201ENST00000431663 360 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.9□□□□□ -1.63
HERVK_113P62684 snoU13.8-201ENST00000458890 104 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC012158.1-204ENST00000483430 465 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.9□□□□□ -1.63
HERVK_113P62684 RNA5SP143-201ENST00000516936 115 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms