Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPL37P21-201ENST00000435890 276 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AL831737.1-201ENST00000441288 271 ntBASIC3.43□□□□□ -1.86
CDH11P55287 COX6CP2-201ENST00000444980 225 ntBASIC3.43□□□□□ -1.86
CDH11P55287 COX6CP12-201ENST00000446748 202 ntBASIC3.43□□□□□ -1.86
CDH11P55287 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH11P55287 CEACAMP4-201ENST00000457676 421 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AC017015.1-201ENST00000477387 286 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH11P55287 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH11P55287 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH11P55287 TXNP6-201ENST00000510190 310 ntBASIC3.43□□□□□ -1.86
CDH11P55287 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH11P55287 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
CDH11P55287 RPL12P22-201ENST00000519073 490 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH11P55287 YPEL5P3-201ENST00000547227 352 ntBASIC3.43□□□□□ -1.86
CDH11P55287 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH11P55287 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CDH11P55287 MIR3158-1-201ENST00000583596 81 ntBASIC3.43□□□□□ -1.86
CDH11P55287 BNIP3P23-201ENST00000599655 511 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AC073544.2-201ENST00000601155 540 ntBASIC3.43□□□□□ -1.86
CDH11P55287 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 AC025594.3-201ENST00000613068 790 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AC011939.3-201ENST00000613686 466 ntBASIC3.43□□□□□ -1.86
CDH11P55287 AC104010.1-201ENST00000616889 150 ntBASIC3.43□□□□□ -1.86
CDH11P55287 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 AC009509.4-201ENST00000619202 509 ntBASIC3.43□□□□□ -1.86
CDH11P55287 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH11P55287 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CDH11P55287 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH11P55287 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.42□□□□□ -1.86
CDH11P55287 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 RNU4-91P-201ENST00000364778 135 ntBASIC3.42□□□□□ -1.86
CDH11P55287 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 RPL30P2-201ENST00000414021 291 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH11P55287 Z97055.1-201ENST00000419730 712 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AL389915.1-201ENST00000422463 466 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC002075.2-201ENST00000425207 252 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC018644.1-201ENST00000429934 551 ntBASIC3.42□□□□□ -1.86
CDH11P55287 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AP000936.2-201ENST00000447151 681 ntBASIC3.42□□□□□ -1.86
CDH11P55287 PAXBP1P1-201ENST00000449315 447 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH11P55287 OR6K1P-201ENST00000456766 971 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC104563.1-201ENST00000476147 376 ntBASIC3.42□□□□□ -1.86
CDH11P55287 FAM172BP-201ENST00000487497 1089 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH11P55287 AC023424.2-201ENST00000493479 777 ntBASIC3.42□□□□□ -1.86
CDH11P55287 RN7SL323P-201ENST00000494712 295 ntBASIC3.42□□□□□ -1.86
CDH11P55287 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 COX7A2P2-201ENST00000505291 250 ntBASIC3.42□□□□□ -1.86
CDH11P55287 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH11P55287 AC010625.1-201ENST00000511296 403 ntBASIC3.42□□□□□ -1.86
CDH11P55287 Y_RNA.695-201ENST00000516715 107 ntBASIC3.42□□□□□ -1.86
CDH11P55287 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH11P55287 AC008489.1-201ENST00000524271 483 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH11P55287 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH11P55287 CYCSP30-201ENST00000546447 172 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH11P55287 AC024909.2-201ENST00000553035 286 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH11P55287 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH11P55287 RSL24D1P11-201ENST00000591045 491 ntBASIC3.42□□□□□ -1.86
CDH11P55287 AC022146.1-201ENST00000595307 847 ntBASIC3.42□□□□□ -1.86
CDH11P55287 U73023.1-201ENST00000603134 700 ntBASIC3.42□□□□□ -1.86
CDH11P55287 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH11P55287 AC239868.4-201ENST00000608318 671 ntBASIC3.42□□□□□ -1.86
CDH11P55287 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 AC092447.10-201ENST00000620607 1652 ntBASIC3.42□□□□□ -1.86
CDH11P55287 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDH11P55287 AL049780.3-201ENST00000624612 1583 ntBASIC3.42□□□□□ -1.86
CDH11P55287 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH11P55287 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CDH11P55287 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CDH11P55287 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH11P55287 PRO1804-201ENST00000623780 2050 ntBASIC3.41□□□□□ -1.86
CDH11P55287 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 RNA5SP258-201ENST00000362750 119 ntBASIC3.41□□□□□ -1.86
CDH11P55287 Y_RNA.234-201ENST00000364409 97 ntBASIC3.41□□□□□ -1.86
CDH11P55287 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH11P55287 RNU6-213P-201ENST00000384051 104 ntBASIC3.41□□□□□ -1.86
CDH11P55287 MIR670-201ENST00000390142 98 ntBASIC3.41□□□□□ -1.86
CDH11P55287 PTMAP2-201ENST00000397627 327 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms