Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
NUP98P52948 AP005212.4-201ENST00000614206 710 ntBASIC2.45□□□□□ -2.02
NUP98P52948 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NUP98P52948 AP005901.5-201ENST00000545779 1796 ntBASIC2.44□□□□□ -2.02
NUP98P52948 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP98P52948 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP98P52948 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP98P52948 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP98P52948 AL592045.1-201ENST00000429867 352 ntBASIC2.44□□□□□ -2.02
NUP98P52948 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP98P52948 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP98P52948 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.44□□□□□ -2.02
NUP98P52948 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP98P52948 RN7SKP234-201ENST00000517173 224 ntBASIC2.44□□□□□ -2.02
NUP98P52948 AC010735.1-201ENST00000567305 1026 ntBASIC2.44□□□□□ -2.02
NUP98P52948 AC005951.1-201ENST00000576706 485 ntBASIC2.44□□□□□ -2.02
NUP98P52948 RPAP2P1-201ENST00000603626 1168 ntBASIC2.44□□□□□ -2.02
NUP98P52948 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NUP98P52948 FAM35CP-201ENST00000554755 2470 ntBASIC2.44□□□□□ -2.02
NUP98P52948 MTCO1P9-201ENST00000505577 1534 ntBASIC2.44□□□□□ -2.02
NUP98P52948 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.43□□□□□ -2.02
NUP98P52948 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NUP98P52948 NPM1P10-201ENST00000398310 865 ntBASIC2.43□□□□□ -2.02
NUP98P52948 AC023347.2-201ENST00000433994 462 ntBASIC2.43□□□□□ -2.02
NUP98P52948 MED6P1-201ENST00000439659 713 ntBASIC2.43□□□□□ -2.02
NUP98P52948 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP98P52948 AC091179.1-201ENST00000461606 579 ntBASIC2.43□□□□□ -2.02
NUP98P52948 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP98P52948 MIR3690-201ENST00000580266 75 ntBASIC2.43□□□□□ -2.02
NUP98P52948 SNRPGP15-201ENST00000600149 222 ntBASIC2.43□□□□□ -2.02
NUP98P52948 AL627309.6-201ENST00000606857 840 ntBASIC2.43□□□□□ -2.02
NUP98P52948 AC005021.1-201ENST00000608730 355 ntBASIC2.43□□□□□ -2.02
NUP98P52948 AL359198.2-201ENST00000611836 194 ntBASIC2.43□□□□□ -2.02
NUP98P52948 Y_RNA.783-201ENST00000613546 102 ntBASIC2.43□□□□□ -2.02
NUP98P52948 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP98P52948 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP98P52948 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUP98P52948 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NUP98P52948 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NUP98P52948 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NUP98P52948 SNORA26.9-201ENST00000391322 122 ntBASIC2.42□□□□□ -2.02
NUP98P52948 AL513331.1-201ENST00000411908 397 ntBASIC2.42□□□□□ -2.02
NUP98P52948 ATP5F1P5-201ENST00000526403 760 ntBASIC2.42□□□□□ -2.02
NUP98P52948 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NUP98P52948 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.42□□□□□ -2.02
NUP98P52948 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NUP98P52948 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP98P52948 RPL31P2-201ENST00000413849 377 ntBASIC2.42□□□□□ -2.02
NUP98P52948 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.42□□□□□ -2.02
NUP98P52948 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP98P52948 RPL34P26-201ENST00000445636 354 ntBASIC2.42□□□□□ -2.02
NUP98P52948 RPL23AP7-203ENST00000449021 469 ntBASIC2.42□□□□□ -2.02
NUP98P52948 RPL31P20-201ENST00000449593 360 ntBASIC2.42□□□□□ -2.02
NUP98P52948 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.42□□□□□ -2.02
NUP98P52948 MTAPP1-201ENST00000489154 819 ntBASIC2.42□□□□□ -2.02
NUP98P52948 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP98P52948 RN7SKP282-201ENST00000516824 299 ntBASIC2.42□□□□□ -2.02
NUP98P52948 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP98P52948 MIR4255-201ENST00000579351 72 ntBASIC2.42□□□□□ -2.02
NUP98P52948 FAM60CP-201ENST00000591086 664 ntBASIC2.42□□□□□ -2.02
NUP98P52948 AC090525.3-201ENST00000605601 189 ntBASIC2.42□□□□□ -2.02
NUP98P52948 AC092184.1-201ENST00000625042 715 ntBASIC2.42□□□□□ -2.02
NUP98P52948 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.42□□□□□ -2.02
NUP98P52948 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NUP98P52948 ZNF720P1-201ENST00000562403 1939 ntBASIC2.41□□□□□ -2.02
NUP98P52948 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP98P52948 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.41□□□□□ -2.02
NUP98P52948 FNDC3CP-201ENST00000420795 1155 ntBASIC2.41□□□□□ -2.02
NUP98P52948 RPL39P40-201ENST00000445481 146 ntBASIC2.41□□□□□ -2.02
NUP98P52948 AC104629.2-201ENST00000468627 598 ntBASIC2.41□□□□□ -2.02
NUP98P52948 MTCO2P32-201ENST00000514865 403 ntBASIC2.41□□□□□ -2.02
NUP98P52948 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP98P52948 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP98P52948 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP98P52948 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP98P52948 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP98P52948 MTCO2P22-201ENST00000603246 681 ntBASIC2.41□□□□□ -2.02
NUP98P52948 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
NUP98P52948 MTND4P34-201ENST00000572715 1371 ntBASIC2.41□□□□□ -2.02
NUP98P52948 MTND5P3-201ENST00000438536 1800 ntBASIC2.41□□□□□ -2.02
NUP98P52948 AP001486.2-201ENST00000561652 5113 ntBASIC2.41□□□□□ -2.02
NUP98P52948 HMGB1P10-201ENST00000395823 563 ntBASIC2.4□□□□□ -2.02
NUP98P52948 AC244098.2-201ENST00000422068 99 ntBASIC2.4□□□□□ -2.02
NUP98P52948 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.4□□□□□ -2.02
NUP98P52948 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.4□□□□□ -2.02
NUP98P52948 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.02
NUP98P52948 RN7SKP219-201ENST00000516825 296 ntBASIC2.4□□□□□ -2.02
NUP98P52948 RN7SKP277-201ENST00000516895 283 ntBASIC2.4□□□□□ -2.02
NUP98P52948 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.4□□□□□ -2.02
NUP98P52948 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.4□□□□□ -2.02
NUP98P52948 AL353997.5-201ENST00000618886 171 ntBASIC2.4□□□□□ -2.02
NUP98P52948 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NUP98P52948 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NUP98P52948 U8.9-201ENST00000365667 134 ntBASIC2.4□□□□□ -2.03
NUP98P52948 RNU6-1140P-201ENST00000410517 106 ntBASIC2.4□□□□□ -2.03
NUP98P52948 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.4□□□□□ -2.03
NUP98P52948 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.4□□□□□ -2.03
NUP98P52948 AC006023.2-201ENST00000609916 167 ntBASIC2.4□□□□□ -2.03
NUP98P52948 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.4□□□□□ -2.03
NUP98P52948 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms