Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HMGB3P21-201ENST00000452483 547 ntBASIC4.97□□□□□ -1.61
MRE11P49959 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.97□□□□□ -1.61
MRE11P49959 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.97□□□□□ -1.61
MRE11P49959 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.97□□□□□ -1.61
MRE11P49959 RN7SL303P-201ENST00000469773 251 ntBASIC4.97□□□□□ -1.61
MRE11P49959 AC087312.1-201ENST00000471411 480 ntBASIC4.97□□□□□ -1.61
MRE11P49959 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.97□□□□□ -1.61
MRE11P49959 RNU2-46P-201ENST00000517038 113 ntBASIC4.97□□□□□ -1.61
MRE11P49959 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.97□□□□□ -1.61
MRE11P49959 OR4A12P-201ENST00000530847 918 ntBASIC4.97□□□□□ -1.61
MRE11P49959 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.97□□□□□ -1.61
MRE11P49959 AC105129.1-201ENST00000560250 297 ntBASIC4.97□□□□□ -1.61
MRE11P49959 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.97□□□□□ -1.61
MRE11P49959 UBE2V2P2-201ENST00000587677 504 ntBASIC4.97□□□□□ -1.61
MRE11P49959 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.97□□□□□ -1.61
MRE11P49959 AC007363.1-201ENST00000604736 620 ntBASIC4.97□□□□□ -1.61
MRE11P49959 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.97□□□□□ -1.61
MRE11P49959 AC064801.1-201ENST00000612025 407 ntBASIC4.97□□□□□ -1.61
MRE11P49959 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 MIR1321-201ENST00000637766 79 ntBASIC4.97□□□□□ -1.61
MRE11P49959 SAGE2P-201ENST00000420011 2126 ntBASIC4.97□□□□□ -1.61
MRE11P49959 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.97□□□□□ -1.61
MRE11P49959 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 OR11H5P-202ENST00000641612 1325 ntBASIC4.97□□□□□ -1.61
MRE11P49959 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
MRE11P49959 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
MRE11P49959 Y_RNA.1-201ENST00000352915 104 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RNU6-289P-201ENST00000364093 107 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
MRE11P49959 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 RNU6-444P-201ENST00000383988 108 ntBASIC4.96□□□□□ -1.62
MRE11P49959 Y_RNA.409-201ENST00000383990 98 ntBASIC4.96□□□□□ -1.62
MRE11P49959 NDUFB4P4-201ENST00000404822 243 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RNA5SP317-201ENST00000410176 116 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RNA5SP311-201ENST00000411290 116 ntBASIC4.96□□□□□ -1.62
MRE11P49959 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MRE11P49959 SPA17P1-201ENST00000416656 452 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RPS3AP9-201ENST00000417027 792 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.96□□□□□ -1.62
MRE11P49959 PIGFP2-201ENST00000421400 651 ntBASIC4.96□□□□□ -1.62
MRE11P49959 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 ISCA1P6-201ENST00000427740 390 ntBASIC4.96□□□□□ -1.62
MRE11P49959 ACTR3P2-201ENST00000439585 1257 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC012671.1-201ENST00000451912 203 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC006511.1-201ENST00000470614 315 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RPS29P25-201ENST00000481709 171 ntBASIC4.96□□□□□ -1.62
MRE11P49959 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 RNF138P1-201ENST00000502765 546 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.96□□□□□ -1.62
MRE11P49959 RNA5SP497-201ENST00000516081 97 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RNA5SP315-201ENST00000516340 116 ntBASIC4.96□□□□□ -1.62
MRE11P49959 RNA5SP312-201ENST00000517068 116 ntBASIC4.96□□□□□ -1.62
MRE11P49959 NARSP2-201ENST00000518524 679 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.96□□□□□ -1.62
MRE11P49959 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 MTND1P35-201ENST00000526739 508 ntBASIC4.96□□□□□ -1.62
MRE11P49959 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.96□□□□□ -1.62
MRE11P49959 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
MRE11P49959 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.96□□□□□ -1.62
MRE11P49959 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.96□□□□□ -1.62
MRE11P49959 HMGB3P26-201ENST00000560051 582 ntBASIC4.96□□□□□ -1.62
MRE11P49959 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.96□□□□□ -1.62
MRE11P49959 AL133457.1-201ENST00000564251 987 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.96□□□□□ -1.62
MRE11P49959 SNORD39.3-201ENST00000584451 71 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC011471.1-201ENST00000585766 187 ntBASIC4.96□□□□□ -1.62
MRE11P49959 NRBF2P1-201ENST00000587407 859 ntBASIC4.96□□□□□ -1.62
MRE11P49959 HMGN1P30-201ENST00000589286 268 ntBASIC4.96□□□□□ -1.62
MRE11P49959 TPMTP1-201ENST00000592307 737 ntBASIC4.96□□□□□ -1.62
MRE11P49959 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.96□□□□□ -1.62
MRE11P49959 AP003122.6-201ENST00000623831 495 ntBASIC4.96□□□□□ -1.62
MRE11P49959 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.96□□□□□ -1.62
MRE11P49959 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MRE11P49959 AL139811.1-201ENST00000424779 2299 ntBASIC4.95□□□□□ -1.62
MRE11P49959 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MRE11P49959 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.95□□□□□ -1.62
MRE11P49959 RPL21P111-201ENST00000418453 477 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.95□□□□□ -1.62
MRE11P49959 MTCO2P11-201ENST00000431069 680 ntBASIC4.95□□□□□ -1.62
MRE11P49959 FCF1P1-201ENST00000432690 571 ntBASIC4.95□□□□□ -1.62
MRE11P49959 ARPC3P1-201ENST00000437218 533 ntBASIC4.95□□□□□ -1.62
MRE11P49959 RSU1P2-202ENST00000437884 485 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AC016831.4-201ENST00000438302 307 ntBASIC4.95□□□□□ -1.62
MRE11P49959 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.95□□□□□ -1.62
MRE11P49959 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.95□□□□□ -1.62
MRE11P49959 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.95□□□□□ -1.62
MRE11P49959 AC010733.1-201ENST00000451515 401 ntBASIC4.95□□□□□ -1.62
MRE11P49959 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.95□□□□□ -1.62
MRE11P49959 AC099563.1-201ENST00000456086 418 ntBASIC4.95□□□□□ -1.62
MRE11P49959 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms