Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RPS3AP9-201ENST00000417027 792 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 SFR1P2-201ENST00000421841 730 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC233981.1-201ENST00000423224 461 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 BX276092.3-201ENST00000424182 230 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AC114973.1-201ENST00000429057 632 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL12P48061 AL590639.1-201ENST00000456484 337 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 RPL21P104-201ENST00000464143 478 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 OR5H5P-201ENST00000503164 928 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AC021146.5-201ENST00000503544 545 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL12P48061 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 IGKV2D-36-201ENST00000518643 226 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL12P48061 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC090079.2-201ENST00000575289 768 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL12P48061 AL009028.1-201ENST00000604895 802 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 VN1R74P-201ENST00000613259 503 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC098679.5-201ENST00000624394 571 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AP000720.1-201ENST00000625091 483 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.66□□□□□ -1.98
CXCL12P48061 AC068620.4-201ENST00000636730 1182 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
CXCL12P48061 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL12P48061 AL136520.1-201ENST00000600311 1322 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CXCL12P48061 MTND5P31-201ENST00000419366 1374 ntBASIC2.65□□□□□ -1.98
CXCL12P48061 AP003122.5-201ENST00000527668 3766 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL12P48061 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL12P48061 FAM133CP-201ENST00000332869 704 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 DYNLT3P1-201ENST00000378574 347 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 RNU6-549P-201ENST00000384433 107 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 OR2B8P-201ENST00000432841 938 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AL590103.1-201ENST00000434488 307 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.65□□□□□ -1.99
CXCL12P48061 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 Z99714.1-201ENST00000450463 807 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 UQCRHP3-201ENST00000451503 251 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 OR6K1P-201ENST00000456766 971 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AL049829.1-201ENST00000465411 156 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 AC090525.1-201ENST00000479116 478 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 AC104629.1-201ENST00000494226 508 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 AC118282.2-201ENST00000508739 374 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 POU5F1P7-201ENST00000508759 541 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 AP001207.1-201ENST00000524051 481 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.65□□□□□ -1.99
CXCL12P48061 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 OR6C73P-201ENST00000546432 358 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 AL133393.1-201ENST00000603277 287 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 RPAP2P1-201ENST00000603626 1168 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 AL355493.4-201ENST00000618530 292 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 U4.3-201ENST00000621047 82 ntBASIC2.65□□□□□ -1.99
CXCL12P48061 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL12P48061 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL12P48061 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL12P48061 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CXCL12P48061 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
CXCL12P48061 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL12P48061 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CXCL12P48061 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 SNORA51.2-201ENST00000364595 132 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AL035405.1-201ENST00000400795 710 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 MTCO2P31-201ENST00000402702 684 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CXCL12P48061 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.64□□□□□ -1.99
CXCL12P48061 RPLP0P7-201ENST00000416050 667 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 RPL7P46-201ENST00000425129 740 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.64□□□□□ -1.99
CXCL12P48061 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL12P48061 HIGD1AP11-201ENST00000438361 280 ntBASIC2.64□□□□□ -1.99
CXCL12P48061 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms