Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL160237.3-201ENST00000604114 1013 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC104307.1-201ENST00000616142 196 ntBASIC1.86□□□□□ -2.11
RPL28P46779 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.86□□□□□ -2.11
RPL28P46779 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 TAB3P1-202ENST00000452645 1634 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC008669.1-201ENST00000565823 2178 ntBASIC1.86□□□□□ -2.11
RPL28P46779 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
RPL28P46779 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL28P46779 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
RPL28P46779 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 SNORD65C-201ENST00000390962 71 ntBASIC1.85□□□□□ -2.11
RPL28P46779 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 AL138885.1-201ENST00000405921 675 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC096533.1-201ENST00000411645 353 ntBASIC1.85□□□□□ -2.11
RPL28P46779 RPS20P25-201ENST00000412447 352 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AL024507.1-201ENST00000412741 274 ntBASIC1.85□□□□□ -2.11
RPL28P46779 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL28P46779 AL451062.2-201ENST00000427515 271 ntBASIC1.85□□□□□ -2.11
RPL28P46779 ZFAND6P1-201ENST00000434138 605 ntBASIC1.85□□□□□ -2.11
RPL28P46779 RPS20P5-201ENST00000434808 360 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC129850.1-201ENST00000436203 508 ntBASIC1.85□□□□□ -2.11
RPL28P46779 RPL23AP74-201ENST00000437246 471 ntBASIC1.85□□□□□ -2.11
RPL28P46779 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 AL691517.1-201ENST00000440833 1235 ntBASIC1.85□□□□□ -2.11
RPL28P46779 Z75741.1-201ENST00000446793 314 ntBASIC1.85□□□□□ -2.11
RPL28P46779 NDUFA5P7-201ENST00000452914 242 ntBASIC1.85□□□□□ -2.11
RPL28P46779 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.85□□□□□ -2.11
RPL28P46779 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.85□□□□□ -2.11
RPL28P46779 CDC42P1-201ENST00000456658 548 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 AC025181.1-201ENST00000477507 416 ntBASIC1.85□□□□□ -2.11
RPL28P46779 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 AIG1P1-201ENST00000503376 148 ntBASIC1.85□□□□□ -2.11
RPL28P46779 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 AC087272.1-201ENST00000523624 533 ntBASIC1.85□□□□□ -2.11
RPL28P46779 OR5AK1P-201ENST00000524837 922 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 NIFKP8-201ENST00000560500 874 ntBASIC1.85□□□□□ -2.11
RPL28P46779 SULT1C2P1-202ENST00000562418 459 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 MIR4446-201ENST00000578505 67 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC040174.2-201ENST00000602701 465 ntBASIC1.85□□□□□ -2.11
RPL28P46779 DUXAP3-201ENST00000603616 594 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC024220.1-201ENST00000603675 484 ntBASIC1.85□□□□□ -2.11
RPL28P46779 BNIP3P11-201ENST00000603878 563 ntBASIC1.85□□□□□ -2.11
RPL28P46779 KATNBL1P5-201ENST00000605015 517 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 AP002826.1-201ENST00000608835 315 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC245100.7-201ENST00000609678 442 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AP000254.1-201ENST00000609934 520 ntBASIC1.85□□□□□ -2.11
RPL28P46779 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.85□□□□□ -2.11
RPL28P46779 AC068880.5-201ENST00000624331 290 ntBASIC1.85□□□□□ -2.11
RPL28P46779 AC106730.3-201ENST00000624568 641 ntBASIC1.85□□□□□ -2.11
RPL28P46779 FO624990.1-201ENST00000636373 85 ntBASIC1.85□□□□□ -2.11
RPL28P46779 GDI2P1-201ENST00000429312 1336 ntBASIC1.85□□□□□ -2.11
RPL28P46779 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.85□□□□□ -2.11
RPL28P46779 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPL28P46779 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPL28P46779 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RPL28P46779 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPL28P46779 SNORD46.1-201ENST00000364139 104 ntBASIC1.84□□□□□ -2.11
RPL28P46779 RNU6-1180P-201ENST00000364935 107 ntBASIC1.84□□□□□ -2.11
RPL28P46779 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPL28P46779 SNORD116-23-201ENST00000384645 92 ntBASIC1.84□□□□□ -2.11
RPL28P46779 MIR627-201ENST00000384979 97 ntBASIC1.84□□□□□ -2.11
RPL28P46779 RNU6-882P-201ENST00000391025 103 ntBASIC1.84□□□□□ -2.11
RPL28P46779 RNA5SP181-201ENST00000410246 98 ntBASIC1.84□□□□□ -2.11
RPL28P46779 RPL7P8-201ENST00000411964 730 ntBASIC1.84□□□□□ -2.11
RPL28P46779 FCF1P2-201ENST00000415284 583 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.84□□□□□ -2.11
RPL28P46779 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AL513043.1-201ENST00000439124 535 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL28P46779 AL050341.1-201ENST00000447743 313 ntBASIC1.84□□□□□ -2.11
RPL28P46779 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms