Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC119751.5-201ENST00000514077 770 ntBASIC2.93□□□□□ -1.94
RORAP35398 AP000889.1-201ENST00000530968 660 ntBASIC2.93□□□□□ -1.94
RORAP35398 AP001317.1-201ENST00000531194 960 ntBASIC2.93□□□□□ -1.94
RORAP35398 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.93□□□□□ -1.94
RORAP35398 AC022080.3-201ENST00000544433 482 ntBASIC2.93□□□□□ -1.94
RORAP35398 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.93□□□□□ -1.94
RORAP35398 H3F3AP1-201ENST00000559984 334 ntBASIC2.93□□□□□ -1.94
RORAP35398 SULT1C2P1-202ENST00000562418 459 ntBASIC2.93□□□□□ -1.94
RORAP35398 LARP7P3-201ENST00000579888 337 ntBASIC2.93□□□□□ -1.94
RORAP35398 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.93□□□□□ -1.94
RORAP35398 DUXAP4-201ENST00000603046 613 ntBASIC2.93□□□□□ -1.94
RORAP35398 BNIP3P11-201ENST00000603878 563 ntBASIC2.93□□□□□ -1.94
RORAP35398 AP003973.1-201ENST00000604639 691 ntBASIC2.93□□□□□ -1.94
RORAP35398 AP000676.4-201ENST00000624659 623 ntBASIC2.93□□□□□ -1.94
RORAP35398 LRRC77P-213ENST00000637727 880 ntBASIC2.93□□□□□ -1.94
RORAP35398 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.93□□□□□ -1.94
RORAP35398 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RORAP35398 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RORAP35398 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RORAP35398 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RORAP35398 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.93□□□□□ -1.94
RORAP35398 AC090740.1-201ENST00000623193 2262 ntBASIC2.93□□□□□ -1.94
RORAP35398 AC233263.6-201ENST00000631132 1963 ntBASIC2.92□□□□□ -1.94
RORAP35398 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 HMGB1P5-201ENST00000255320 642 ntBASIC2.92□□□□□ -1.94
RORAP35398 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RORAP35398 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
RORAP35398 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.92□□□□□ -1.94
RORAP35398 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 U3.26-201ENST00000391236 204 ntBASIC2.92□□□□□ -1.94
RORAP35398 U3.29-201ENST00000391296 212 ntBASIC2.92□□□□□ -1.94
RORAP35398 RPL7P25-201ENST00000404151 721 ntBASIC2.92□□□□□ -1.94
RORAP35398 AL024474.1-201ENST00000404655 591 ntBASIC2.92□□□□□ -1.94
RORAP35398 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.92□□□□□ -1.94
RORAP35398 RPS7P9-201ENST00000414704 586 ntBASIC2.92□□□□□ -1.94
RORAP35398 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.92□□□□□ -1.94
RORAP35398 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
RORAP35398 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 AC006960.1-201ENST00000419980 153 ntBASIC2.92□□□□□ -1.94
RORAP35398 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.92□□□□□ -1.94
RORAP35398 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RORAP35398 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.92□□□□□ -1.94
RORAP35398 AL831737.1-201ENST00000441288 271 ntBASIC2.92□□□□□ -1.94
RORAP35398 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.92□□□□□ -1.94
RORAP35398 RPS20P24-201ENST00000457473 361 ntBASIC2.92□□□□□ -1.94
RORAP35398 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 SNORA48.10-201ENST00000516965 160 ntBASIC2.92□□□□□ -1.94
RORAP35398 AP001207.2-201ENST00000519490 539 ntBASIC2.92□□□□□ -1.94
RORAP35398 AC018630.1-201ENST00000541376 925 ntBASIC2.92□□□□□ -1.94
RORAP35398 AC087897.1-201ENST00000550134 156 ntBASIC2.92□□□□□ -1.94
RORAP35398 AC126177.3-201ENST00000551839 688 ntBASIC2.92□□□□□ -1.94
RORAP35398 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.92□□□□□ -1.94
RORAP35398 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.92□□□□□ -1.94
RORAP35398 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.92□□□□□ -1.94
RORAP35398 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.92□□□□□ -1.94
RORAP35398 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.92□□□□□ -1.94
RORAP35398 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 AC008083.4-201ENST00000615076 444 ntBASIC2.92□□□□□ -1.94
RORAP35398 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.92□□□□□ -1.94
RORAP35398 AL512427.1-201ENST00000618593 349 ntBASIC2.92□□□□□ -1.94
RORAP35398 AC026634.1-201ENST00000634369 198 ntBASIC2.92□□□□□ -1.94
RORAP35398 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RORAP35398 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.91□□□□□ -1.94
RORAP35398 AC011460.1-201ENST00000636268 1834 ntBASIC2.91□□□□□ -1.94
RORAP35398 AP003122.5-201ENST00000527668 3766 ntBASIC2.91□□□□□ -1.94
RORAP35398 SNORA80A-201ENST00000363922 136 ntBASIC2.91□□□□□ -1.94
RORAP35398 SNORA71.1-201ENST00000364523 117 ntBASIC2.91□□□□□ -1.94
RORAP35398 RNU6-707P-201ENST00000364647 95 ntBASIC2.91□□□□□ -1.94
RORAP35398 SNORA51.6-201ENST00000384151 125 ntBASIC2.91□□□□□ -1.94
RORAP35398 SNORA1.3-201ENST00000384676 136 ntBASIC2.91□□□□□ -1.94
RORAP35398 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RORAP35398 RNU6-712P-201ENST00000410558 100 ntBASIC2.91□□□□□ -1.94
RORAP35398 BTF3P8-201ENST00000414577 526 ntBASIC2.91□□□□□ -1.94
RORAP35398 LUZP4P1-201ENST00000415420 344 ntBASIC2.91□□□□□ -1.94
RORAP35398 COTL1P1-201ENST00000422309 375 ntBASIC2.91□□□□□ -1.94
RORAP35398 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.91□□□□□ -1.94
RORAP35398 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.91□□□□□ -1.94
RORAP35398 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
RORAP35398 AC107083.1-201ENST00000439643 279 ntBASIC2.91□□□□□ -1.94
RORAP35398 RPL21P2-201ENST00000440049 481 ntBASIC2.91□□□□□ -1.94
RORAP35398 RPL23AP58-201ENST00000440453 469 ntBASIC2.91□□□□□ -1.94
RORAP35398 RPS12P18-201ENST00000442381 270 ntBASIC2.91□□□□□ -1.94
RORAP35398 AL590664.1-201ENST00000448065 339 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.91□□□□□ -1.94
RORAP35398 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.91□□□□□ -1.94
RORAP35398 SNORA59A-201ENST00000459326 152 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.91□□□□□ -1.94
RORAP35398 AC096751.1-202ENST00000502691 1067 ntBASIC2.91□□□□□ -1.94
RORAP35398 DYNLL1P6-201ENST00000503440 264 ntBASIC2.91□□□□□ -1.94
RORAP35398 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC009812.2-201ENST00000517657 457 ntBASIC2.91□□□□□ -1.94
RORAP35398 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RORAP35398 AC068339.2-201ENST00000534395 618 ntBASIC2.91□□□□□ -1.94
RORAP35398 AC087894.1-201ENST00000538359 518 ntBASIC2.91□□□□□ -1.94
RORAP35398 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.91□□□□□ -1.94
RORAP35398 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.91□□□□□ -1.94
RORAP35398 LARP7P2-201ENST00000575306 125 ntBASIC2.91□□□□□ -1.94
RORAP35398 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms