Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.16□□□□□ -1.74
CIITAP33076 AC008011.1-201ENST00000545989 227 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.16□□□□□ -1.74
CIITAP33076 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.16□□□□□ -1.74
CIITAP33076 HSPE1P3-201ENST00000559254 309 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AL133457.1-201ENST00000564251 987 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AL360157.1-201ENST00000565962 87 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.16□□□□□ -1.74
CIITAP33076 AP003465.2-201ENST00000602571 373 ntBASIC4.16□□□□□ -1.74
CIITAP33076 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.16□□□□□ -1.74
CIITAP33076 AC013476.2-201ENST00000614456 459 ntBASIC4.16□□□□□ -1.74
CIITAP33076 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 AC027807.2-201ENST00000616099 408 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AL603839.4-201ENST00000624658 1005 ntBASIC4.16□□□□□ -1.74
CIITAP33076 U6.101-201ENST00000637707 76 ntBASIC4.16□□□□□ -1.74
CIITAP33076 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 TEX21P-201ENST00000447107 1476 ntBASIC4.16□□□□□ -1.74
CIITAP33076 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.16□□□□□ -1.74
CIITAP33076 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CIITAP33076 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CIITAP33076 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.15□□□□□ -1.74
CIITAP33076 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.74
CIITAP33076 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CIITAP33076 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CIITAP33076 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CIITAP33076 RNU6-1215P-201ENST00000384441 102 ntBASIC4.15□□□□□ -1.75
CIITAP33076 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CIITAP33076 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CIITAP33076 EI24P1-201ENST00000416584 867 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC083875.1-201ENST00000419509 405 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CIITAP33076 AL389915.1-201ENST00000422463 466 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AL445669.1-201ENST00000426743 755 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC010975.2-201ENST00000427781 588 ntBASIC4.15□□□□□ -1.75
CIITAP33076 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.15□□□□□ -1.75
CIITAP33076 LSM1P1-201ENST00000438629 273 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AF228730.2-201ENST00000438784 848 ntBASIC4.15□□□□□ -1.75
CIITAP33076 GDI2P2-201ENST00000445131 608 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC239367.2-201ENST00000447309 705 ntBASIC4.15□□□□□ -1.75
CIITAP33076 RPS3AP46-201ENST00000448352 682 ntBASIC4.15□□□□□ -1.75
CIITAP33076 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.15□□□□□ -1.75
CIITAP33076 AC099563.1-201ENST00000456086 418 ntBASIC4.15□□□□□ -1.75
CIITAP33076 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.15□□□□□ -1.75
CIITAP33076 AP000797.1-201ENST00000478870 387 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AP002812.1-201ENST00000495378 474 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC107401.1-201ENST00000503426 685 ntBASIC4.15□□□□□ -1.75
CIITAP33076 SLC25A15P5-201ENST00000508033 253 ntBASIC4.15□□□□□ -1.75
CIITAP33076 FABP5P5-201ENST00000515537 406 ntBASIC4.15□□□□□ -1.75
CIITAP33076 RNA5SP216-201ENST00000516111 123 ntBASIC4.15□□□□□ -1.75
CIITAP33076 RN7SKP116-201ENST00000516902 319 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AP002748.2-201ENST00000528671 348 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.15□□□□□ -1.75
CIITAP33076 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.15□□□□□ -1.75
CIITAP33076 MIR4444-1-201ENST00000581696 74 ntBASIC4.15□□□□□ -1.75
CIITAP33076 MIR4444-2-201ENST00000584390 74 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC083760.1-201ENST00000589621 670 ntBASIC4.15□□□□□ -1.75
CIITAP33076 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.15□□□□□ -1.75
CIITAP33076 NDUFA8P1-201ENST00000605525 367 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC097468.3-201ENST00000607956 456 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC103710.4-201ENST00000609301 899 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AC104010.1-201ENST00000616889 150 ntBASIC4.15□□□□□ -1.75
CIITAP33076 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.15□□□□□ -1.75
CIITAP33076 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.15□□□□□ -1.75
CIITAP33076 AC119674.1-207ENST00000641355 633 ntBASIC4.15□□□□□ -1.75
CIITAP33076 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CIITAP33076 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.15□□□□□ -1.75
CIITAP33076 AP001486.2-201ENST00000561652 5113 ntBASIC4.15□□□□□ -1.75
CIITAP33076 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.15□□□□□ -1.75
CIITAP33076 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.15□□□□□ -1.75
CIITAP33076 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CIITAP33076 AC008725.1-201ENST00000605123 2263 ntBASIC4.14□□□□□ -1.75
CIITAP33076 RNU6-517P-201ENST00000384362 110 ntBASIC4.14□□□□□ -1.75
CIITAP33076 Y_RNA.516-201ENST00000384541 124 ntBASIC4.14□□□□□ -1.75
CIITAP33076 RNU6-297P-201ENST00000384636 107 ntBASIC4.14□□□□□ -1.75
CIITAP33076 RNU6-952P-201ENST00000391164 108 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AC016769.3-201ENST00000396562 315 ntBASIC4.14□□□□□ -1.75
CIITAP33076 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.14□□□□□ -1.75
CIITAP33076 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 HMGB1P11-201ENST00000413899 637 ntBASIC4.14□□□□□ -1.75
CIITAP33076 HMGB3P20-201ENST00000417997 600 ntBASIC4.14□□□□□ -1.75
CIITAP33076 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.14□□□□□ -1.75
CIITAP33076 OFD1P18Y-201ENST00000420889 959 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.14□□□□□ -1.75
CIITAP33076 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.14□□□□□ -1.75
CIITAP33076 MTND1P4-201ENST00000435196 415 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.14□□□□□ -1.75
CIITAP33076 AL022238.1-201ENST00000442557 355 ntBASIC4.14□□□□□ -1.75
CIITAP33076 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 DNAJC19P1-201ENST00000455312 319 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.14□□□□□ -1.75
CIITAP33076 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 AC114981.1-201ENST00000503897 678 ntBASIC4.14□□□□□ -1.75
CIITAP33076 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 HMGN1P11-201ENST00000508668 303 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AC093809.1-201ENST00000509155 340 ntBASIC4.14□□□□□ -1.75
CIITAP33076 CDC42P4-201ENST00000510507 563 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AC026412.2-201ENST00000512270 1075 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms