Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA3P32297 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA3P32297 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA3P32297 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA3P32297 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
CHRNA3P32297 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNA3P32297 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNA3P32297 RNU6-173P-201ENST00000364215 104 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 MIR491-201ENST00000384877 84 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 Y_RNA.578-201ENST00000390903 88 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 HMGN1P24-201ENST00000412282 298 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 RPL7P30-201ENST00000420888 709 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 XKRYP1-201ENST00000423438 492 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC233728.2-201ENST00000425348 757 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 MTATP6P17-201ENST00000431030 672 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 XKRYP2-201ENST00000432915 492 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 SNRPEP4-201ENST00000435815 279 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNA3P32297 RPL17P49-201ENST00000443728 411 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 RPL7P38-201ENST00000488396 739 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 DSTNP2-201ENST00000504533 515 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC098862.1-201ENST00000504991 413 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC021678.1-201ENST00000505195 936 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC026427.2-201ENST00000506228 536 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.38□□□□□ -1.87
CHRNA3P32297 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA3P32297 RNU6-311P-201ENST00000516224 102 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC026407.1-201ENST00000518369 204 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AP000889.1-201ENST00000530968 660 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 MTCYBP23-201ENST00000558717 1102 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 GTF2IP8-201ENST00000560687 584 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC245036.5-201ENST00000596330 847 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 CLIC4P2-201ENST00000601934 717 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AL450336.1-201ENST00000605180 586 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC069545.1-201ENST00000605671 358 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA3P32297 AC099778.2-201ENST00000610904 211 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC005332.6-201ENST00000613178 446 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 MIR7112-201ENST00000616126 65 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AC140725.3-201ENST00000616193 880 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 AL356585.4-201ENST00000623078 1229 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA3P32297 MIR3651-201ENST00000630427 90 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 U6.101-201ENST00000637707 76 ntBASIC3.38□□□□□ -1.87
CHRNA3P32297 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA3P32297 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNA3P32297 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA3P32297 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHRNA3P32297 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA3P32297 AC090740.1-201ENST00000623193 2262 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHRNA3P32297 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA3P32297 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA3P32297 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 SNORA38.1-201ENST00000364172 131 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA3P32297 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA3P32297 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA3P32297 RPS15AP38-201ENST00000413110 372 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 AL137014.1-201ENST00000420490 1226 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA3P32297 AC092648.1-201ENST00000425870 423 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 MTCO1P39-201ENST00000426148 480 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 PSMA6P3-201ENST00000428242 164 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 EZH2P1-201ENST00000431167 291 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA3P32297 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 USP9YP22-201ENST00000438971 294 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 HMGB3P6-201ENST00000444896 598 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 Z73417.1-201ENST00000447373 778 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 AC112492.1-201ENST00000449607 712 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 Z82190.1-201ENST00000454534 490 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 PTGES3P5-201ENST00000455109 434 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 SUMO2P2-201ENST00000456482 255 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 ARPC3P2-201ENST00000457786 533 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA3P32297 AC069528.1-202ENST00000482888 637 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA3P32297 AC114322.1-201ENST00000506771 926 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA3P32297 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA3P32297 RN7SKP287-201ENST00000516546 266 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
CHRNA3P32297 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms