Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MTATP6P14-201ENST00000455189 673 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA9P31269 AC104982.1-201ENST00000478775 574 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AP001025.2-201ENST00000490908 477 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXA9P31269 KLHL2P1-201ENST00000508691 521 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXA9P31269 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXA9P31269 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXA9P31269 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA9P31269 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
HOXA9P31269 SERPINE4P-201ENST00000554978 281 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 NIFKP8-201ENST00000560500 874 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 ZNF971P-201ENST00000562068 1249 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXA9P31269 BNIP3P27-201ENST00000599991 412 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AC013412.1-201ENST00000610687 192 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AL110115.1-201ENST00000614396 364 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AC022306.3-201ENST00000619930 550 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AP003476.1-201ENST00000623984 516 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HOXA9P31269 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA9P31269 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA9P31269 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA9P31269 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA9P31269 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA9P31269 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA9P31269 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
HOXA9P31269 RNU6-272P-201ENST00000411028 104 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 ATG3P1-201ENST00000419507 911 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC027644.1-201ENST00000419595 298 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 MTATP6P4-201ENST00000427725 675 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC092634.2-201ENST00000428146 1010 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 YWHAZP8-201ENST00000436935 731 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXA9P31269 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA9P31269 AC008427.1-201ENST00000503102 655 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC026414.1-201ENST00000504046 698 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA9P31269 AC004062.1-201ENST00000509926 645 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA9P31269 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA9P31269 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXA9P31269 AC114781.4-201ENST00000513707 639 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.95□□□□□ -1.94
HOXA9P31269 SNORA31.20-201ENST00000517111 133 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA9P31269 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA9P31269 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA9P31269 MIR4435-1-201ENST00000582552 80 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 MAGOH2P-202ENST00000584384 429 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 BNIP3P39-201ENST00000601077 554 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC022509.4-201ENST00000621404 572 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AP003122.6-201ENST00000623831 495 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AL109659.3-201ENST00000624985 950 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC004808.1-201ENST00000627671 721 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 IGHVIII-44-202ENST00000636235 289 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC099654.8-201ENST00000637757 681 ntBASIC2.95□□□□□ -1.94
HOXA9P31269 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA9P31269 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA9P31269 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA9P31269 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HOXA9P31269 OR1L1-202ENST00000373686 1083 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 SNORA51.12-201ENST00000384448 134 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 MIR196B-201ENST00000384852 84 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 MIR34A-201ENST00000385130 110 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 RNU6-298P-201ENST00000390888 96 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HOXA9P31269 RNU6-575P-201ENST00000411326 105 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 RPL7P10-201ENST00000417407 739 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 YPEL5P1-201ENST00000419731 367 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC013410.2-201ENST00000422627 201 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 Z93242.1-201ENST00000427102 353 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA9P31269 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA9P31269 AC002542.1-201ENST00000440683 193 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 RPL32P28-201ENST00000443577 397 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA9P31269 RPL23AP15-201ENST00000450202 459 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC233982.1-201ENST00000451247 436 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 FCF1P6-201ENST00000456841 595 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA9P31269 snoU13.4-201ENST00000458916 104 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 NAP1L1P3-201ENST00000462291 880 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 GAPDHP39-201ENST00000481866 979 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA9P31269 AC091860.1-201ENST00000505723 432 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 MTCYBP37-201ENST00000510642 1133 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.94□□□□□ -1.94
HOXA9P31269 RNU4-29P-201ENST00000515943 174 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 SNORA31.1-201ENST00000515993 133 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 SNORA31.5-201ENST00000516190 133 ntBASIC2.94□□□□□ -1.94
HOXA9P31269 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA9P31269 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA9P31269 OR4G1P-201ENST00000588632 938 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms