Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 VN1R82P-201ENST00000601481 356 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AL109653.1-201ENST00000603091 248 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 SRGNP1-201ENST00000603392 451 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 DUXAP11-201ENST00000603858 526 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AL158042.1-201ENST00000605338 460 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC112220.3-201ENST00000605502 502 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC092106.3-201ENST00000611308 722 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AL355365.1-201ENST00000616480 294 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFRAP16234 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 SGO1P2-201ENST00000429458 1589 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 ZNF876P-202ENST00000398732 1485 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFRAP16234 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
PDGFRAP16234 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFRAP16234 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFRAP16234 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 RNU4-28P-201ENST00000364739 141 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 RNU6-157P-201ENST00000383957 107 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 MIR184-201ENST00000384962 84 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFRAP16234 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 RNU6-954P-201ENST00000411355 107 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AL356968.1-201ENST00000416622 474 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC006960.1-201ENST00000419980 153 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AC006946.1-201ENST00000429106 328 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC097713.2-201ENST00000430199 356 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 ZYG11AP1-201ENST00000430329 837 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 BX322784.1-201ENST00000455793 1077 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFRAP16234 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC008155.2-201ENST00000464337 397 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC091153.1-201ENST00000466297 402 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 FAM172BP-201ENST00000487497 1089 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFRAP16234 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AC105914.1-201ENST00000511798 226 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC010265.1-201ENST00000513509 211 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AC093677.1-201ENST00000514414 678 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PDGFRAP16234 COX6CP8-201ENST00000522620 226 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFRAP16234 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.55□□□□□ -1.84
PDGFRAP16234 AL390240.1-201ENST00000612950 384 ntBASIC3.55□□□□□ -1.84
PDGFRAP16234 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFRAP16234 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFRAP16234 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFRAP16234 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFRAP16234 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFRAP16234 FAM133CP-201ENST00000332869 704 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFRAP16234 RNA5SP72-201ENST00000364442 117 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 RNU6-343P-201ENST00000364709 104 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 SNORA70.4-201ENST00000365509 134 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFRAP16234 RNVU1-14-201ENST00000384770 164 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AL136372.1-201ENST00000403060 228 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 RNU4-65P-201ENST00000410473 140 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 BX323014.1-201ENST00000412876 237 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFRAP16234 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFRAP16234 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 MTND5P14-201ENST00000441481 1267 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFRAP16234 RPL23AP31-201ENST00000456160 467 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 RPL23AP14-201ENST00000468281 468 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC112198.1-201ENST00000505369 1220 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AC074250.1-201ENST00000511117 192 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AP001029.3-201ENST00000588063 596 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 BDH2P1-201ENST00000602288 736 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AP001330.4-201ENST00000604350 154 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AC012468.1-201ENST00000604888 430 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 AC107952.2-201ENST00000606048 486 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AL592295.2-201ENST00000612578 206 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFRAP16234 AC127502.3-201ENST00000636170 1206 ntBASIC3.54□□□□□ -1.84
PDGFRAP16234 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms