Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC126177.3-201ENST00000551839 688 ntBASIC3.8□□□□□ -1.8
PCNAP12004 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.8□□□□□ -1.8
PCNAP12004 ZNF519P3-201ENST00000557158 1032 ntBASIC3.8□□□□□ -1.8
PCNAP12004 UBE2L4-201ENST00000587688 464 ntBASIC3.8□□□□□ -1.8
PCNAP12004 AC010928.3-201ENST00000587712 541 ntBASIC3.8□□□□□ -1.8
PCNAP12004 TPMTP1-201ENST00000592307 737 ntBASIC3.8□□□□□ -1.8
PCNAP12004 IGHV3-29-201ENST00000604817 344 ntBASIC3.8□□□□□ -1.8
PCNAP12004 AC011816.2-201ENST00000607089 556 ntBASIC3.8□□□□□ -1.8
PCNAP12004 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.8□□□□□ -1.8
PCNAP12004 AP000254.1-201ENST00000609934 520 ntBASIC3.8□□□□□ -1.8
PCNAP12004 MIR6867-201ENST00000610636 67 ntBASIC3.8□□□□□ -1.8
PCNAP12004 AL158801.5-201ENST00000623123 465 ntBASIC3.8□□□□□ -1.8
PCNAP12004 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.8□□□□□ -1.8
PCNAP12004 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PCNAP12004 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PCNAP12004 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
PCNAP12004 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
PCNAP12004 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.8□□□□□ -1.8
PCNAP12004 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCNAP12004 AC092125.1-201ENST00000562568 1995 ntBASIC3.8□□□□□ -1.8
PCNAP12004 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCNAP12004 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
PCNAP12004 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
PCNAP12004 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCNAP12004 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PCNAP12004 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.79□□□□□ -1.8
PCNAP12004 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCNAP12004 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCNAP12004 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 RPS20P2-201ENST00000402520 389 ntBASIC3.79□□□□□ -1.8
PCNAP12004 CCNG1P1-201ENST00000406783 885 ntBASIC3.79□□□□□ -1.8
PCNAP12004 EI24P1-201ENST00000416584 867 ntBASIC3.79□□□□□ -1.8
PCNAP12004 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.79□□□□□ -1.8
PCNAP12004 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.79□□□□□ -1.8
PCNAP12004 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 ATP5HP2-201ENST00000433885 485 ntBASIC3.79□□□□□ -1.8
PCNAP12004 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCNAP12004 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 AC104308.1-201ENST00000454621 333 ntBASIC3.79□□□□□ -1.8
PCNAP12004 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
PCNAP12004 BTF3L4P4-201ENST00000506381 449 ntBASIC3.79□□□□□ -1.8
PCNAP12004 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
PCNAP12004 OR4R3P-201ENST00000525084 838 ntBASIC3.79□□□□□ -1.8
PCNAP12004 AP003497.1-201ENST00000528472 562 ntBASIC3.79□□□□□ -1.8
PCNAP12004 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.79□□□□□ -1.8
PCNAP12004 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 AGGF1P4-201ENST00000568249 801 ntBASIC3.79□□□□□ -1.8
PCNAP12004 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.79□□□□□ -1.8
PCNAP12004 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.79□□□□□ -1.8
PCNAP12004 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.79□□□□□ -1.8
PCNAP12004 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
PCNAP12004 SEPT7P9-203ENST00000604116 343 ntBASIC3.79□□□□□ -1.8
PCNAP12004 HULC.1-201ENST00000612720 240 ntBASIC3.79□□□□□ -1.8
PCNAP12004 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCNAP12004 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
PCNAP12004 AC079597.1-201ENST00000624306 508 ntBASIC3.79□□□□□ -1.8
PCNAP12004 AL603839.4-201ENST00000624658 1005 ntBASIC3.79□□□□□ -1.8
PCNAP12004 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCNAP12004 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCNAP12004 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCNAP12004 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCNAP12004 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.78□□□□□ -1.8
PCNAP12004 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCNAP12004 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCNAP12004 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.78□□□□□ -1.8
PCNAP12004 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCNAP12004 Y_RNA.46-201ENST00000362695 102 ntBASIC3.78□□□□□ -1.8
PCNAP12004 RNU4-91P-201ENST00000364778 135 ntBASIC3.78□□□□□ -1.8
PCNAP12004 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCNAP12004 RNU6-629P-201ENST00000384061 103 ntBASIC3.78□□□□□ -1.8
PCNAP12004 RNU6-297P-201ENST00000384636 107 ntBASIC3.78□□□□□ -1.8
PCNAP12004 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCNAP12004 RNU6-712P-201ENST00000410558 100 ntBASIC3.78□□□□□ -1.8
PCNAP12004 AL359704.1-201ENST00000411586 781 ntBASIC3.78□□□□□ -1.8
PCNAP12004 HMGN1P14-201ENST00000412459 517 ntBASIC3.78□□□□□ -1.8
PCNAP12004 AL356095.1-201ENST00000417217 199 ntBASIC3.78□□□□□ -1.8
PCNAP12004 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.78□□□□□ -1.8
PCNAP12004 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.78□□□□□ -1.8
PCNAP12004 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.78□□□□□ -1.8
PCNAP12004 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.78□□□□□ -1.8
PCNAP12004 AC092641.1-201ENST00000440229 772 ntBASIC3.78□□□□□ -1.8
PCNAP12004 AL592447.1-201ENST00000447592 540 ntBASIC3.78□□□□□ -1.8
PCNAP12004 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.78□□□□□ -1.8
PCNAP12004 snoU109.4-201ENST00000458953 143 ntBASIC3.78□□□□□ -1.8
PCNAP12004 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.78□□□□□ -1.8
PCNAP12004 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.78□□□□□ -1.8
PCNAP12004 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.78□□□□□ -1.8
PCNAP12004 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.78□□□□□ -1.8
PCNAP12004 HIGD1AP5-201ENST00000529959 259 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms