Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP1P11387 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
TOP1P11387 HMGN1P5-201ENST00000448591 263 ntBASIC3.3□□□□□ -1.88
TOP1P11387 PABPC1P3-201ENST00000469174 459 ntBASIC3.3□□□□□ -1.88
TOP1P11387 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TOP1P11387 AC117522.3-201ENST00000507974 584 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC121161.1-201ENST00000510606 652 ntBASIC3.3□□□□□ -1.88
TOP1P11387 RNU6-334P-201ENST00000517072 102 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP1P11387 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.3□□□□□ -1.88
TOP1P11387 AC007536.1-201ENST00000533382 349 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP1P11387 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.3□□□□□ -1.88
TOP1P11387 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP1P11387 AL020997.3-201ENST00000602843 359 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC055876.5-201ENST00000605667 259 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC106028.5-201ENST00000610332 395 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AL020991.1-201ENST00000612314 373 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC040168.1-201ENST00000623594 991 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
TOP1P11387 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOP1P11387 AP003122.5-201ENST00000527668 3766 ntBASIC3.29□□□□□ -1.88
TOP1P11387 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.29□□□□□ -1.88
TOP1P11387 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TOP1P11387 AL355143.1-201ENST00000407101 841 ntBASIC3.29□□□□□ -1.88
TOP1P11387 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.29□□□□□ -1.88
TOP1P11387 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP1P11387 RPL23AP16-201ENST00000441715 421 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AL592437.1-201ENST00000443781 492 ntBASIC3.29□□□□□ -1.88
TOP1P11387 MOB1AP2-201ENST00000446060 614 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AL096829.2-201ENST00000446582 742 ntBASIC3.29□□□□□ -1.88
TOP1P11387 snoU109.4-201ENST00000458953 143 ntBASIC3.29□□□□□ -1.88
TOP1P11387 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP1P11387 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP1P11387 VN1R104P-201ENST00000505115 1009 ntBASIC3.29□□□□□ -1.88
TOP1P11387 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP1P11387 AC016550.1-201ENST00000505348 785 ntBASIC3.29□□□□□ -1.88
TOP1P11387 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.29□□□□□ -1.88
TOP1P11387 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP1P11387 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.29□□□□□ -1.88
TOP1P11387 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.29□□□□□ -1.88
TOP1P11387 FAM60BP-201ENST00000578364 658 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AC138761.3-201ENST00000579993 334 ntBASIC3.29□□□□□ -1.88
TOP1P11387 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP1P11387 AC133794.1-201ENST00000602731 914 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AC106791.2-201ENST00000604680 391 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
TOP1P11387 AC010338.1-201ENST00000621823 717 ntBASIC3.29□□□□□ -1.88
TOP1P11387 SCARNA15.3-201ENST00000626315 122 ntBASIC3.29□□□□□ -1.88
TOP1P11387 SCARNA4.1-201ENST00000628597 123 ntBASIC3.29□□□□□ -1.88
TOP1P11387 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP1P11387 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
TOP1P11387 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
TOP1P11387 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
TOP1P11387 SGO1P1-201ENST00000603525 1447 ntBASIC3.28□□□□□ -1.88
TOP1P11387 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TOP1P11387 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TOP1P11387 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.28□□□□□ -1.88
TOP1P11387 AL365361.1-201ENST00000566942 3481 ntBASIC3.28□□□□□ -1.88
TOP1P11387 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TOP1P11387 SNORA5B-201ENST00000363786 132 ntBASIC3.28□□□□□ -1.88
TOP1P11387 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
TOP1P11387 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
TOP1P11387 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TOP1P11387 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
TOP1P11387 SNORD88.1-201ENST00000408684 91 ntBASIC3.28□□□□□ -1.88
TOP1P11387 RPS15AP38-201ENST00000413110 372 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC008173.1-201ENST00000418901 264 ntBASIC3.28□□□□□ -1.88
TOP1P11387 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.28□□□□□ -1.88
TOP1P11387 AC079780.1-201ENST00000428259 207 ntBASIC3.28□□□□□ -1.88
TOP1P11387 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP1P11387 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP1P11387 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP1P11387 RPL32P14-201ENST00000463196 378 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP1P11387 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 PRELID3BP4-201ENST00000515476 571 ntBASIC3.28□□□□□ -1.88
TOP1P11387 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 AP000790.1-201ENST00000528891 737 ntBASIC3.28□□□□□ -1.88
TOP1P11387 HPRT1P3-201ENST00000539521 576 ntBASIC3.28□□□□□ -1.88
TOP1P11387 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TOP1P11387 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP1P11387 SNORD39.3-201ENST00000584451 71 ntBASIC3.28□□□□□ -1.88
TOP1P11387 BNIP3P31-201ENST00000604515 566 ntBASIC3.28□□□□□ -1.88
TOP1P11387 ATP1B3P1-201ENST00000605365 821 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC069234.5-201ENST00000611056 416 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AL355493.4-201ENST00000618530 292 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC009318.4-201ENST00000620496 486 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC010872.1-201ENST00000624225 675 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms