Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.84□□□□□ -1.79
RB1P06400 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.84□□□□□ -1.79
RB1P06400 AC087481.2-201ENST00000565492 330 ntBASIC3.84□□□□□ -1.79
RB1P06400 AL360157.1-201ENST00000565962 87 ntBASIC3.84□□□□□ -1.79
RB1P06400 AC136618.2-201ENST00000575091 400 ntBASIC3.84□□□□□ -1.79
RB1P06400 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.84□□□□□ -1.79
RB1P06400 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.84□□□□□ -1.79
RB1P06400 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.84□□□□□ -1.79
RB1P06400 AP000811.1-201ENST00000603803 651 ntBASIC3.84□□□□□ -1.79
RB1P06400 AC090186.1-201ENST00000605991 572 ntBASIC3.84□□□□□ -1.79
RB1P06400 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
RB1P06400 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.84□□□□□ -1.79
RB1P06400 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.79
RB1P06400 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RB1P06400 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.84□□□□□ -1.8
RB1P06400 MAPK10-253ENST00000641010 4072 ntBASIC3.83□□□□□ -1.8
RB1P06400 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RB1P06400 Y_RNA.18-201ENST00000362461 102 ntBASIC3.83□□□□□ -1.8
RB1P06400 RNU6-289P-201ENST00000364093 107 ntBASIC3.83□□□□□ -1.8
RB1P06400 Y_RNA.234-201ENST00000364409 97 ntBASIC3.83□□□□□ -1.8
RB1P06400 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RB1P06400 SNORA48.5-201ENST00000391143 135 ntBASIC3.83□□□□□ -1.8
RB1P06400 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.83□□□□□ -1.8
RB1P06400 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
RB1P06400 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RB1P06400 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.83□□□□□ -1.8
RB1P06400 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.83□□□□□ -1.8
RB1P06400 AC011233.1-201ENST00000422812 283 ntBASIC3.83□□□□□ -1.8
RB1P06400 AL593851.1-201ENST00000426171 157 ntBASIC3.83□□□□□ -1.8
RB1P06400 AL512649.1-201ENST00000428997 581 ntBASIC3.83□□□□□ -1.8
RB1P06400 CETN4P-201ENST00000432407 469 ntBASIC3.83□□□□□ -1.8
RB1P06400 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 AL117351.1-201ENST00000438864 766 ntBASIC3.83□□□□□ -1.8
RB1P06400 PAXBP1P1-201ENST00000449315 447 ntBASIC3.83□□□□□ -1.8
RB1P06400 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.83□□□□□ -1.8
RB1P06400 HMGB3P22-202ENST00000451823 572 ntBASIC3.83□□□□□ -1.8
RB1P06400 ARPC3P2-201ENST00000457786 533 ntBASIC3.83□□□□□ -1.8
RB1P06400 AP001486.1-201ENST00000463339 476 ntBASIC3.83□□□□□ -1.8
RB1P06400 AC104563.1-201ENST00000476147 376 ntBASIC3.83□□□□□ -1.8
RB1P06400 RPL23AP55-201ENST00000498163 452 ntBASIC3.83□□□□□ -1.8
RB1P06400 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.83□□□□□ -1.8
RB1P06400 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.83□□□□□ -1.8
RB1P06400 TXNP6-201ENST00000510190 310 ntBASIC3.83□□□□□ -1.8
RB1P06400 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.83□□□□□ -1.8
RB1P06400 MIR2114-201ENST00000516645 80 ntBASIC3.83□□□□□ -1.8
RB1P06400 SNORA70.18-201ENST00000516696 98 ntBASIC3.83□□□□□ -1.8
RB1P06400 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RB1P06400 AC008011.1-201ENST00000545989 227 ntBASIC3.83□□□□□ -1.8
RB1P06400 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.83□□□□□ -1.8
RB1P06400 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 AL353997.4-201ENST00000586196 166 ntBASIC3.83□□□□□ -1.8
RB1P06400 AL360219.1-201ENST00000610230 366 ntBASIC3.83□□□□□ -1.8
RB1P06400 AL590282.1-201ENST00000610379 1136 ntBASIC3.83□□□□□ -1.8
RB1P06400 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.83□□□□□ -1.8
RB1P06400 CRYM-AS1-204ENST00000637983 556 ntBASIC3.83□□□□□ -1.8
RB1P06400 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RB1P06400 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.83□□□□□ -1.8
RB1P06400 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RB1P06400 AP001148.1-201ENST00000624124 2359 ntBASIC3.82□□□□□ -1.8
RB1P06400 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RB1P06400 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 RNU6-433P-201ENST00000363216 104 ntBASIC3.82□□□□□ -1.8
RB1P06400 SNORA51.2-201ENST00000364595 132 ntBASIC3.82□□□□□ -1.8
RB1P06400 RNA5SP88-201ENST00000365560 109 ntBASIC3.82□□□□□ -1.8
RB1P06400 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.82□□□□□ -1.8
RB1P06400 RNU6-723P-201ENST00000383973 107 ntBASIC3.82□□□□□ -1.8
RB1P06400 SNORD17-201ENST00000390930 237 ntBASIC3.82□□□□□ -1.8
RB1P06400 AF228730.1-201ENST00000397972 663 ntBASIC3.82□□□□□ -1.8
RB1P06400 HLFP1-201ENST00000402375 499 ntBASIC3.82□□□□□ -1.8
RB1P06400 RN7SKP111-201ENST00000410349 271 ntBASIC3.82□□□□□ -1.8
RB1P06400 VPS26BP1-201ENST00000417155 755 ntBASIC3.82□□□□□ -1.8
RB1P06400 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.82□□□□□ -1.8
RB1P06400 RPS6P15-201ENST00000431996 751 ntBASIC3.82□□□□□ -1.8
RB1P06400 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.82□□□□□ -1.8
RB1P06400 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.82□□□□□ -1.8
RB1P06400 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.82□□□□□ -1.8
RB1P06400 AL356535.1-201ENST00000440335 398 ntBASIC3.82□□□□□ -1.8
RB1P06400 MTCO1P27-201ENST00000448269 226 ntBASIC3.82□□□□□ -1.8
RB1P06400 snoU13.8-201ENST00000458890 104 ntBASIC3.82□□□□□ -1.8
RB1P06400 AC025518.1-201ENST00000479856 347 ntBASIC3.82□□□□□ -1.8
RB1P06400 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.82□□□□□ -1.8
RB1P06400 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.82□□□□□ -1.8
RB1P06400 AC093809.1-201ENST00000509155 340 ntBASIC3.82□□□□□ -1.8
RB1P06400 LTV1P1-201ENST00000510683 1237 ntBASIC3.82□□□□□ -1.8
RB1P06400 RNU6-1073P-201ENST00000517182 106 ntBASIC3.82□□□□□ -1.8
RB1P06400 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.82□□□□□ -1.8
RB1P06400 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.82□□□□□ -1.8
RB1P06400 AC018630.1-201ENST00000541376 925 ntBASIC3.82□□□□□ -1.8
RB1P06400 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
RB1P06400 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.82□□□□□ -1.8
RB1P06400 AC008751.2-201ENST00000597885 980 ntBASIC3.82□□□□□ -1.8
RB1P06400 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms