Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC006023.2-201ENST00000609916 167 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC123767.1-202ENST00000620407 817 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 U6.101-201ENST00000637707 76 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC073346.2-201ENST00000624724 2058 ntBASIC2.59□□□□□ -2
HLA-DPB1P04440 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPB1P04440 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 SNORA54-201ENST00000384281 123 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 SNORA40.2-201ENST00000390847 128 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 SNRPEP2-201ENST00000397592 279 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 MTCO3P12-201ENST00000416718 547 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPB1P04440 RPL36AP6-201ENST00000435770 321 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 RNF2P1-201ENST00000442955 1010 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AL162389.1-201ENST00000449233 177 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC026412.2-201ENST00000512270 1075 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 RN7SKP31-201ENST00000516354 278 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 AC091163.3-201ENST00000518269 1144 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC125611.1-201ENST00000549563 229 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPB1P04440 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC004832.5-201ENST00000608677 401 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 AF129408.1-201ENST00000608767 431 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 AL359198.2-201ENST00000611836 194 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 MIR8057-201ENST00000620957 69 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 AC109315.1-201ENST00000584143 1347 ntBASIC2.58□□□□□ -2
HLA-DPB1P04440 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DPB1P04440 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPB1P04440 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DPB1P04440 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPB1P04440 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DPB1P04440 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
HLA-DPB1P04440 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPB1P04440 SNRPEP3-201ENST00000338402 276 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPB1P04440 OR5H2-201ENST00000355273 945 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 MIR422A-201ENST00000362286 90 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 RNA5SP295-201ENST00000362655 121 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 RNU4-51P-201ENST00000364206 140 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 SNORA71.1-201ENST00000364523 117 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPB1P04440 Y_RNA.472-201ENST00000384322 102 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 SNORA26.7-201ENST00000391288 122 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 RNU2-15P-201ENST00000410692 191 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC007435.1-201ENST00000421086 415 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 PSMA6P3-201ENST00000428242 164 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 NEK4P1-201ENST00000433383 879 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 RPL21P2-201ENST00000440049 481 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DPB1P04440 MTATP6P14-201ENST00000455189 673 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DPB1P04440 snoU13.22-201ENST00000459428 104 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 RPS27AP1-201ENST00000475545 471 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC017015.1-201ENST00000477387 286 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AC096571.1-202ENST00000506634 735 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.57□□□□□ -2
HLA-DPB1P04440 SNORA70.24-201ENST00000517233 118 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC104986.1-201ENST00000517978 436 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AC087808.1-201ENST00000520501 361 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AL157394.1-201ENST00000562983 1224 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC074050.1-201ENST00000563247 211 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 MTND3P13-201ENST00000574391 343 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms