Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC006254.3-201ENST00000603353 884 ntBASIC1.16□□□□□ -2.22
APOBP04114 LRRC77P-213ENST00000637727 880 ntBASIC1.16□□□□□ -2.22
APOBP04114 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
APOBP04114 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
APOBP04114 AC092447.7-201ENST00000422212 1621 ntBASIC1.15□□□□□ -2.22
APOBP04114 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
APOBP04114 RNU2-20P-201ENST00000410425 191 ntBASIC1.15□□□□□ -2.22
APOBP04114 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.15□□□□□ -2.22
APOBP04114 ARL4AP2-201ENST00000507378 601 ntBASIC1.15□□□□□ -2.22
APOBP04114 AC107393.1-201ENST00000512403 346 ntBASIC1.15□□□□□ -2.22
APOBP04114 AC117532.1-201ENST00000514638 323 ntBASIC1.15□□□□□ -2.22
APOBP04114 AC025281.1-201ENST00000567026 265 ntBASIC1.15□□□□□ -2.22
APOBP04114 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.15□□□□□ -2.22
APOBP04114 AC099778.2-201ENST00000610904 211 ntBASIC1.15□□□□□ -2.22
APOBP04114 ZNF720P1-201ENST00000562403 1939 ntBASIC1.15□□□□□ -2.22
APOBP04114 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
APOBP04114 RNU6-984P-201ENST00000363236 109 ntBASIC1.15□□□□□ -2.23
APOBP04114 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
APOBP04114 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.15□□□□□ -2.23
APOBP04114 MTND6P18-201ENST00000439477 513 ntBASIC1.15□□□□□ -2.23
APOBP04114 RPL12P25-201ENST00000455592 494 ntBASIC1.15□□□□□ -2.23
APOBP04114 NAMPTP2-201ENST00000505629 1115 ntBASIC1.15□□□□□ -2.23
APOBP04114 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.15□□□□□ -2.23
APOBP04114 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.15□□□□□ -2.23
APOBP04114 ATP5F1P1-201ENST00000433775 569 ntBASIC1.15□□□□□ -2.23
APOBP04114 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.15□□□□□ -2.23
APOBP04114 RN7SL622P-201ENST00000585292 275 ntBASIC1.15□□□□□ -2.23
APOBP04114 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
APOBP04114 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.15□□□□□ -2.23
APOBP04114 SNORA67.5-201ENST00000391036 107 ntBASIC1.15□□□□□ -2.23
APOBP04114 AC019129.1-201ENST00000403786 261 ntBASIC1.15□□□□□ -2.23
APOBP04114 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.15□□□□□ -2.23
APOBP04114 SETP10-201ENST00000424368 814 ntBASIC1.15□□□□□ -2.23
APOBP04114 RPS6P12-201ENST00000432491 726 ntBASIC1.15□□□□□ -2.23
APOBP04114 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.15□□□□□ -2.23
APOBP04114 MTCYBP17-201ENST00000503579 789 ntBASIC1.15□□□□□ -2.23
APOBP04114 COX6CP5-201ENST00000527162 228 ntBASIC1.15□□□□□ -2.23
APOBP04114 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.15□□□□□ -2.23
APOBP04114 AC009314.1-201ENST00000603871 304 ntBASIC1.15□□□□□ -2.23
APOBP04114 AL645939.4-201ENST00000604495 135 ntBASIC1.15□□□□□ -2.23
APOBP04114 AC107294.3-201ENST00000609211 526 ntBASIC1.15□□□□□ -2.23
APOBP04114 AC093775.1-201ENST00000624154 1868 ntBASIC1.14□□□□□ -2.23
APOBP04114 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
APOBP04114 SNORA48.3-201ENST00000391081 134 ntBASIC1.14□□□□□ -2.23
APOBP04114 CDC42P1-201ENST00000456658 548 ntBASIC1.14□□□□□ -2.23
APOBP04114 AC108734.3-201ENST00000481241 1165 ntBASIC1.14□□□□□ -2.23
APOBP04114 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.14□□□□□ -2.23
APOBP04114 MIR4506-201ENST00000584693 77 ntBASIC1.14□□□□□ -2.23
APOBP04114 AL356575.1-201ENST00000603008 283 ntBASIC1.14□□□□□ -2.23
APOBP04114 VN1R7P-201ENST00000619242 903 ntBASIC1.14□□□□□ -2.23
APOBP04114 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
APOBP04114 SNORA50A-202ENST00000629536 136 ntBASIC1.14□□□□□ -2.23
APOBP04114 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
APOBP04114 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.14□□□□□ -2.23
APOBP04114 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
APOBP04114 RNA5SP338-201ENST00000410495 85 ntBASIC1.14□□□□□ -2.23
APOBP04114 CBWD4P-201ENST00000445695 655 ntBASIC1.14□□□□□ -2.23
APOBP04114 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.14□□□□□ -2.23
APOBP04114 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.14□□□□□ -2.23
APOBP04114 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.14□□□□□ -2.23
APOBP04114 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.14□□□□□ -2.23
APOBP04114 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.14□□□□□ -2.23
APOBP04114 AL360085.1-201ENST00000604713 532 ntBASIC1.14□□□□□ -2.23
APOBP04114 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.14□□□□□ -2.23
APOBP04114 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.14□□□□□ -2.23
APOBP04114 AL133216.2-202ENST00000634512 349 ntBASIC1.14□□□□□ -2.23
APOBP04114 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.14□□□□□ -2.23
APOBP04114 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
APOBP04114 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.14□□□□□ -2.23
APOBP04114 TOMM22P6-201ENST00000465035 409 ntBASIC1.14□□□□□ -2.23
APOBP04114 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
APOBP04114 AC079804.2-201ENST00000490376 200 ntBASIC1.14□□□□□ -2.23
APOBP04114 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.14□□□□□ -2.23
APOBP04114 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.14□□□□□ -2.23
APOBP04114 AC241377.1-201ENST00000619797 406 ntBASIC1.14□□□□□ -2.23
APOBP04114 AC067852.7-201ENST00000623270 535 ntBASIC1.14□□□□□ -2.23
APOBP04114 MIR6715B-201ENST00000637172 77 ntBASIC1.14□□□□□ -2.23
APOBP04114 AL592437.2-201ENST00000421655 2434 ntBASIC1.14□□□□□ -2.23
APOBP04114 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
APOBP04114 AL645939.1-201ENST00000453429 797 ntBASIC1.13□□□□□ -2.23
APOBP04114 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.13□□□□□ -2.23
APOBP04114 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.13□□□□□ -2.23
APOBP04114 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
APOBP04114 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.13□□□□□ -2.23
APOBP04114 AC034102.8-201ENST00000615146 484 ntBASIC1.13□□□□□ -2.23
APOBP04114 AC103988.1-201ENST00000566382 2177 ntBASIC1.13□□□□□ -2.23
APOBP04114 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
APOBP04114 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.13□□□□□ -2.23
APOBP04114 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.13□□□□□ -2.23
APOBP04114 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
APOBP04114 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.13□□□□□ -2.23
APOBP04114 AC007687.1-201ENST00000602704 304 ntBASIC1.13□□□□□ -2.23
APOBP04114 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
APOBP04114 RN7SKP123-201ENST00000410732 291 ntBASIC1.13□□□□□ -2.23
APOBP04114 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.13□□□□□ -2.23
APOBP04114 ARPC3P1-201ENST00000437218 533 ntBASIC1.13□□□□□ -2.23
APOBP04114 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
APOBP04114 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.13□□□□□ -2.23
APOBP04114 AC013562.2-201ENST00000611632 603 ntBASIC1.13□□□□□ -2.23
APOBP04114 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms