Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC023141.8-201ENST00000442554 208 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 NOTCH2P1-201ENST00000443481 624 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 CEACAMP6-201ENST00000452007 574 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 ACA64.4-201ENST00000459070 127 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 RN7SL172P-201ENST00000460535 303 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 RPL23AP40-201ENST00000487630 390 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 CEACAMP10-202ENST00000495431 496 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC023424.1-201ENST00000496058 459 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 RPS24P16-201ENST00000497294 392 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC110794.1-201ENST00000505816 425 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 RNA5SP230-201ENST00000517039 122 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 RNU6-1271P-201ENST00000517049 105 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 NRBF2P4-201ENST00000520874 850 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 ERHP1-201ENST00000523006 310 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 AC091516.1-201ENST00000549191 703 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFAP04085 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFAP04085 BDH2P1-201ENST00000602288 736 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC002044.1-201ENST00000606707 158 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 RPSAP73-201ENST00000614820 330 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 MIR6837-201ENST00000620884 64 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 AC067931.1-201ENST00000624190 671 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PDGFAP04085 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFAP04085 PRO1804-201ENST00000623780 2050 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFAP04085 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 SET-203ENST00000372688 801 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFAP04085 Y_RNA.476-201ENST00000384347 108 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 SNORA41-201ENST00000384675 132 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 Y_RNA.556-201ENST00000384677 113 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 RNU6-882P-201ENST00000391025 103 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 RPL7L1P9-201ENST00000431298 745 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 HMGB1P12-201ENST00000438594 598 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC099799.1-201ENST00000439809 192 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 RPL12P3-201ENST00000440080 396 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFAP04085 U8.20-201ENST00000459445 131 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC090686.1-201ENST00000481577 749 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC092436.3-201ENST00000511788 257 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC108043.1-201ENST00000512696 574 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 GMPSP1-201ENST00000514075 579 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 RNA5SP384-201ENST00000516615 116 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFAP04085 AC092447.9-201ENST00000603395 144 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC104695.3-201ENST00000604052 296 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC011373.1-201ENST00000607270 237 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 MIR15A-201ENST00000607334 83 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AC100812.1-201ENST00000607622 580 ntBASIC5.28□□□□□ -1.56
PDGFAP04085 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFAP04085 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFAP04085 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFAP04085 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDGFAP04085 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PDGFAP04085 AL353796.1-201ENST00000561542 3241 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDGFAP04085 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 RNA5SP319-201ENST00000362768 119 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RNA5SP507-201ENST00000363603 121 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 Y_RNA.153-201ENST00000363615 91 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 RNU6-76P-201ENST00000384060 104 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RNU6-356P-201ENST00000384140 107 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 MIR223-201ENST00000385204 110 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RNU6-55P-201ENST00000411092 107 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RNU6-847P-201ENST00000411115 108 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFAP04085 RPL23AP27-201ENST00000415161 451 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 BX842559.1-201ENST00000419615 532 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 PRDX3P3-201ENST00000447765 522 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AC090804.1-201ENST00000448870 490 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AL450023.1-201ENST00000450868 751 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms