Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.26□□□□□ -2.05
CPSF4O95639 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.26□□□□□ -2.05
CPSF4O95639 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
CPSF4O95639 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF4O95639 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 RNU6-1073P-201ENST00000517182 106 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.26□□□□□ -2.05
CPSF4O95639 UBTFL10-201ENST00000528532 562 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF4O95639 OR4R2P-201ENST00000530815 597 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF4O95639 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF4O95639 MIR4474-201ENST00000579189 78 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 LARP7P3-201ENST00000579888 337 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.26□□□□□ -2.05
CPSF4O95639 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.26□□□□□ -2.05
CPSF4O95639 AC104237.2-201ENST00000612456 443 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 U73479.1-201ENST00000618062 168 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.26□□□□□ -2.05
CPSF4O95639 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.26□□□□□ -2.05
CPSF4O95639 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
CPSF4O95639 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CPSF4O95639 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CPSF4O95639 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPSF4O95639 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPSF4O95639 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CPSF4O95639 RNU6-619P-201ENST00000365146 108 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CPSF4O95639 OR1L1-202ENST00000373686 1083 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 RNU6-921P-201ENST00000384361 107 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CPSF4O95639 RNU2-71P-201ENST00000411395 189 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 TAF13P2-201ENST00000416876 286 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 OFD1P18Y-201ENST00000420889 959 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC233981.1-201ENST00000423224 461 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 MTCO1P39-201ENST00000426148 480 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC096632.1-201ENST00000427395 310 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 AC234064.1-201ENST00000436312 247 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 HMGN3P1-201ENST00000453847 193 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 OR6K1P-201ENST00000456766 971 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.25□□□□□ -2.05
CPSF4O95639 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 AC109471.1-201ENST00000511631 612 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AP003467.2-201ENST00000520175 319 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 OR8K4P-201ENST00000534608 872 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CPSF4O95639 AC107954.1-201ENST00000565906 727 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.25□□□□□ -2.05
CPSF4O95639 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF4O95639 AL133393.1-201ENST00000603277 287 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC005000.2-201ENST00000605468 310 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AL158211.2-201ENST00000607282 395 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC078880.5-201ENST00000617845 421 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 AC098679.5-201ENST00000624394 571 ntBASIC2.25□□□□□ -2.05
CPSF4O95639 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CPSF4O95639 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.25□□□□□ -2.05
CPSF4O95639 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF4O95639 RNU6-263P-201ENST00000363811 107 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 RNU6-207P-201ENST00000384137 107 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 MIR518C-201ENST00000384822 101 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 MIR649-201ENST00000384843 97 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AL354719.1-201ENST00000406535 843 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 MRPL50P2-201ENST00000416821 482 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF4O95639 AC108938.1-201ENST00000451204 136 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 RPL21P104-201ENST00000464143 478 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 SYPL1P1-201ENST00000473622 768 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AC087190.1-201ENST00000484462 480 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 LINC00888-204ENST00000487386 421 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 MTCO3P44-201ENST00000510977 541 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 RNA5SP148-201ENST00000516527 94 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC006518.2-201ENST00000542513 940 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 SETP2-201ENST00000553886 926 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC074051.3-201ENST00000570238 358 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 AL109653.1-201ENST00000603091 248 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AC113368.1-201ENST00000603736 382 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AC025588.3-201ENST00000604182 274 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF4O95639 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC079228.1-201ENST00000624774 1049 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms