Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX6O95475 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
SIX6O95475 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
SIX6O95475 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SIX6O95475 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 SNORA71.3-201ENST00000362582 128 ntBASIC1.66□□□□□ -2.14
SIX6O95475 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.66□□□□□ -2.14
SIX6O95475 MTCYBP45-201ENST00000435243 565 ntBASIC1.66□□□□□ -2.14
SIX6O95475 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.66□□□□□ -2.14
SIX6O95475 FTH1P2-201ENST00000466086 412 ntBASIC1.66□□□□□ -2.14
SIX6O95475 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.66□□□□□ -2.14
SIX6O95475 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.66□□□□□ -2.14
SIX6O95475 FABP5P6-201ENST00000510588 409 ntBASIC1.66□□□□□ -2.14
SIX6O95475 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX6O95475 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX6O95475 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.66□□□□□ -2.14
SIX6O95475 AL356280.1-201ENST00000603614 379 ntBASIC1.66□□□□□ -2.14
SIX6O95475 AL109618.2-201ENST00000605527 211 ntBASIC1.66□□□□□ -2.14
SIX6O95475 OR2AS2P-201ENST00000606902 342 ntBASIC1.66□□□□□ -2.14
SIX6O95475 AC009570.1-201ENST00000609599 745 ntBASIC1.66□□□□□ -2.14
SIX6O95475 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.66□□□□□ -2.14
SIX6O95475 MIR6076-201ENST00000617521 113 ntBASIC1.66□□□□□ -2.14
SIX6O95475 AL158801.5-201ENST00000623123 465 ntBASIC1.66□□□□□ -2.14
SIX6O95475 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.66□□□□□ -2.14
SIX6O95475 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.66□□□□□ -2.14
SIX6O95475 MFSD8-245ENST00000641743 948 ntBASIC1.66□□□□□ -2.14
SIX6O95475 AC007342.9-201ENST00000623877 1385 ntBASIC1.66□□□□□ -2.14
SIX6O95475 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SIX6O95475 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SIX6O95475 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
SIX6O95475 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.65□□□□□ -2.15
SIX6O95475 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SIX6O95475 OR5J1P-201ENST00000313544 939 ntBASIC1.65□□□□□ -2.15
SIX6O95475 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX6O95475 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX6O95475 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX6O95475 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.65□□□□□ -2.15
SIX6O95475 OR6C72P-201ENST00000451403 892 ntBASIC1.65□□□□□ -2.15
SIX6O95475 SNORA84-201ENST00000459229 133 ntBASIC1.65□□□□□ -2.15
SIX6O95475 RPL23AP70-201ENST00000483361 460 ntBASIC1.65□□□□□ -2.15
SIX6O95475 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.65□□□□□ -2.15
SIX6O95475 AC016065.2-201ENST00000514530 444 ntBASIC1.65□□□□□ -2.15
SIX6O95475 RNA5SP471-201ENST00000516971 106 ntBASIC1.65□□□□□ -2.15
SIX6O95475 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.65□□□□□ -2.15
SIX6O95475 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.65□□□□□ -2.15
SIX6O95475 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX6O95475 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SIX6O95475 GTF3AP2-201ENST00000557014 266 ntBASIC1.65□□□□□ -2.15
SIX6O95475 AC107954.1-201ENST00000565906 727 ntBASIC1.65□□□□□ -2.15
SIX6O95475 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX6O95475 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
SIX6O95475 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX6O95475 AC090616.3-201ENST00000582184 217 ntBASIC1.65□□□□□ -2.15
SIX6O95475 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.65□□□□□ -2.15
SIX6O95475 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.65□□□□□ -2.15
SIX6O95475 AC008749.1-201ENST00000597650 306 ntBASIC1.65□□□□□ -2.15
SIX6O95475 AC135178.6-201ENST00000605314 398 ntBASIC1.65□□□□□ -2.15
SIX6O95475 AL359535.1-201ENST00000612100 1087 ntBASIC1.65□□□□□ -2.15
SIX6O95475 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.65□□□□□ -2.15
SIX6O95475 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SIX6O95475 AC095031.1-201ENST00000623685 672 ntBASIC1.65□□□□□ -2.15
SIX6O95475 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SIX6O95475 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SIX6O95475 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SIX6O95475 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SIX6O95475 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SIX6O95475 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SIX6O95475 SET-203ENST00000372688 801 ntTSL 2 BASIC1.64□□□□□ -2.15
SIX6O95475 XGY1-201ENST00000381172 446 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AP002784.2-201ENST00000397300 549 ntBASIC1.64□□□□□ -2.15
SIX6O95475 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AL139156.1-201ENST00000412785 841 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC009963.1-201ENST00000417265 157 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC019097.1-201ENST00000424783 735 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC063976.3-201ENST00000426849 329 ntBASIC1.64□□□□□ -2.15
SIX6O95475 RPL23AP83-201ENST00000434984 473 ntBASIC1.64□□□□□ -2.15
SIX6O95475 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.64□□□□□ -2.15
SIX6O95475 HMGB1P26-201ENST00000452520 628 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AL139109.1-201ENST00000455491 297 ntBASIC1.64□□□□□ -2.15
SIX6O95475 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.64□□□□□ -2.15
SIX6O95475 ATG12P2-201ENST00000456830 416 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC011825.1-201ENST00000484967 388 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.64□□□□□ -2.15
SIX6O95475 RNU6-1004P-201ENST00000516584 111 ntBASIC1.64□□□□□ -2.15
SIX6O95475 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.64□□□□□ -2.15
SIX6O95475 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SIX6O95475 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SIX6O95475 AC093014.1-201ENST00000548926 724 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC126177.3-201ENST00000551839 688 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.64□□□□□ -2.15
SIX6O95475 HMGB1P6-201ENST00000569046 646 ntBASIC1.64□□□□□ -2.15
SIX6O95475 MIR5089-201ENST00000580047 84 ntBASIC1.64□□□□□ -2.15
SIX6O95475 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms