Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC068137.3-201ENST00000639191 341 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC073869.6-201ENST00000640656 341 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 AL022578.1-201ENST00000439330 1433 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL592437.2-201ENST00000421655 2434 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL365361.1-201ENST00000566942 3481 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL356583.2-201ENST00000426536 280 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 MTATP6P13-201ENST00000438531 667 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 IFNWP4-201ENST00000453148 294 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 OR6K1P-201ENST00000456766 971 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL591473.1-201ENST00000464297 313 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC097462.2-201ENST00000504623 481 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC022861.1-201ENST00000522981 663 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 MTND4LP18-201ENST00000526864 291 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC022878.1-201ENST00000530684 149 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 MIR5697-201ENST00000578045 78 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC108747.1-201ENST00000609508 535 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL445264.1-201ENST00000621719 171 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC083843.3-201ENST00000623679 2186 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 AC099654.12-201ENST00000639868 649 ntBASIC5.44□□□□□ -1.54
RAPGEF3O95398 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RAPGEF3O95398 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.44□□□□□ -1.54
RAPGEF3O95398 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 Y_RNA.41-201ENST00000362646 102 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 RNU6-289P-201ENST00000364093 107 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 SNORA40.3-201ENST00000390964 122 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AL031679.1-201ENST00000400616 525 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 AIMP1P1-201ENST00000418670 937 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 MTCO2P5-201ENST00000422621 426 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AL513174.1-201ENST00000423182 629 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 MTCYBP5-201ENST00000423752 1135 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 PABPC1P3-201ENST00000469174 459 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 RN7SL585P-201ENST00000470538 280 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC023424.2-201ENST00000493479 777 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 AF131216.2-201ENST00000512316 564 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 IGKV2-26-201ENST00000518305 343 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 RPL21P7-201ENST00000557463 483 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC138749.5-201ENST00000611461 208 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC131902.3-201ENST00000611767 581 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC116165.2-201ENST00000616705 206 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 BMS1P21-201ENST00000634565 365 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 LINC01109-201ENST00000603837 3081 ntBASIC5.43□□□□□ -1.54
RAPGEF3O95398 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAPGEF3O95398 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RAPGEF3O95398 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAPGEF3O95398 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAPGEF3O95398 AC005832.2-201ENST00000538921 1430 ntBASIC5.42□□□□□ -1.54
RAPGEF3O95398 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAPGEF3O95398 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAPGEF3O95398 RNU6-259P-201ENST00000383999 107 ntBASIC5.42□□□□□ -1.54
RAPGEF3O95398 RNU5A-6P-201ENST00000384136 116 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms