Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP4O75379 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP4O75379 NMD3P1-201ENST00000439704 1488 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP4O75379 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAMP4O75379 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VAMP4O75379 AC092125.1-201ENST00000562568 1995 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.31□□□□□ -1.56
VAMP4O75379 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAMP4O75379 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VAMP4O75379 AC083843.3-201ENST00000623679 2186 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RNU6-1120P-201ENST00000362988 108 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RNA5SP130-201ENST00000364431 114 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RPL31P1-201ENST00000398116 372 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RNA5SP317-201ENST00000410176 116 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RNA5SP311-201ENST00000411290 116 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AL359704.1-201ENST00000411586 781 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RPS20P15-201ENST00000412792 311 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 AL035410.1-201ENST00000427409 427 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 GTF2IP20-201ENST00000431663 360 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 OR4C10P-201ENST00000434991 931 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.31□□□□□ -1.56
VAMP4O75379 SEPT14P3-201ENST00000439401 183 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AL732372.2-207ENST00000445840 183 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 NUTF2P7-201ENST00000453086 375 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 SEPT14P2-201ENST00000453405 183 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RPS20P20-201ENST00000460498 340 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC103987.1-201ENST00000473394 348 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC093267.1-201ENST00000489176 961 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC139783.2-201ENST00000504847 1145 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 SEPT14P4-201ENST00000513445 186 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RNA5SP315-201ENST00000516340 116 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 RNA5SP312-201ENST00000517068 116 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 FO082796.1-201ENST00000523795 183 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 OR5AL2P-201ENST00000532185 920 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.31□□□□□ -1.56
VAMP4O75379 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.31□□□□□ -1.56
VAMP4O75379 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 HIF1AP1-201ENST00000553642 175 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.31□□□□□ -1.56
VAMP4O75379 CYP4A43P-201ENST00000568156 121 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC053481.3-201ENST00000577881 843 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC007038.2-201ENST00000608095 740 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 LINC00901.1-201ENST00000617252 152 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 YWHAEP7-203ENST00000622054 312 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC008785.1-201ENST00000624475 456 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC055839.1-201ENST00000634467 498 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.31□□□□□ -1.56
VAMP4O75379 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
VAMP4O75379 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAMP4O75379 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VAMP4O75379 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAMP4O75379 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAMP4O75379 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VAMP4O75379 ZNF680P1-201ENST00000436625 1469 ntBASIC5.31□□□□□ -1.56
VAMP4O75379 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.31□□□□□ -1.56
VAMP4O75379 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAMP4O75379 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP4O75379 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP4O75379 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
VAMP4O75379 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.3□□□□□ -1.56
VAMP4O75379 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.3□□□□□ -1.56
VAMP4O75379 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAMP4O75379 RNU6-28P-201ENST00000362378 107 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 RNU11-4P-201ENST00000391149 133 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 MRPL50P2-201ENST00000416821 482 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.3□□□□□ -1.56
VAMP4O75379 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 AC005297.2-201ENST00000450430 606 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 RPS20P24-201ENST00000457473 361 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 AC010587.1-201ENST00000505809 469 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.3□□□□□ -1.56
VAMP4O75379 ARL2BPP2-201ENST00000550907 489 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 AC007424.1-203ENST00000554613 687 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 AC055876.1-202ENST00000567053 138 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.3□□□□□ -1.56
VAMP4O75379 MIR4697-201ENST00000582977 78 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 AC091953.2-201ENST00000623979 160 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 AC138649.5-201ENST00000637456 137 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 AC024614.3-201ENST00000637860 256 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.3□□□□□ -1.56
VAMP4O75379 MAPK10-320ENST00000641462 6696 ntBASIC5.3□□□□□ -1.56
VAMP4O75379 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP4O75379 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
VAMP4O75379 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms