Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.453-201ENST00000384223 109 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL121834.1-202ENST00000404494 277 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 RN7SKP235-201ENST00000410662 305 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC127391.1-201ENST00000411737 98 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS4BO75351 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VPS4BO75351 OR51AB1P-201ENST00000429046 620 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 FCF1P1-201ENST00000432690 571 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 UBE2V1P13-201ENST00000436983 439 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 HMGB1P31-201ENST00000437242 427 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC069285.2-201ENST00000440210 275 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 ABCF2P2-201ENST00000450549 296 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC092989.1-201ENST00000481235 277 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS4BO75351 RNU6-27P-201ENST00000516146 107 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 MRPL49P2-201ENST00000521066 465 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 PTP4A1P6-201ENST00000531034 478 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS4BO75351 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS4BO75351 SETP7-201ENST00000552169 453 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS4BO75351 MIR3146-201ENST00000580367 79 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC060771.1-201ENST00000582031 164 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AP000907.4-201ENST00000604143 237 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL160290.3-201ENST00000604869 165 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL009028.1-201ENST00000604895 802 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC055876.5-201ENST00000605667 259 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AP001330.5-201ENST00000607176 411 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL031666.3-201ENST00000609320 1006 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL161734.1-201ENST00000609720 557 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS4BO75351 AL133173.2-201ENST00000614270 90 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AC002550.2-201ENST00000621246 394 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 AL356585.4-201ENST00000623078 1229 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS4BO75351 RAD17P1-201ENST00000418130 2042 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4BO75351 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS4BO75351 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS4BO75351 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC019097.1-201ENST00000424783 735 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC006946.1-201ENST00000429106 328 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 AL132765.1-201ENST00000434165 553 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 RPL23AP93-201ENST00000440847 484 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC114495.1-201ENST00000441274 436 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 RPL23AP43-201ENST00000446445 471 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 RPL23AP20-201ENST00000447965 421 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 MTND1P9-201ENST00000453775 944 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 FGF7P3-201ENST00000454645 303 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS4BO75351 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC079804.1-201ENST00000461922 436 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC010469.1-201ENST00000463864 576 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 HMGB1P25-201ENST00000468402 607 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 RNU6-528P-201ENST00000516926 100 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 IGLVIV-65-201ENST00000517313 360 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC109635.3-201ENST00000529536 185 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS4BO75351 AP000907.2-201ENST00000530827 353 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS4BO75351 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4BO75351 MIR4429-201ENST00000580105 73 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 MIR3138-201ENST00000585238 82 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC073091.2-201ENST00000603205 907 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 MIR98-201ENST00000606724 119 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC090948.1-201ENST00000607464 549 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC114781.5-201ENST00000615297 108 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC019226.1-201ENST00000625666 515 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS4BO75351 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS4BO75351 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS4BO75351 AL138713.1-201ENST00000624026 2130 ntBASIC4.28□□□□□ -1.72
VPS4BO75351 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4BO75351 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VPS4BO75351 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VPS4BO75351 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
VPS4BO75351 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms