Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.82□□□□□ -1.8
LDB2O43679 GLRXP1-201ENST00000423261 334 ntBASIC3.82□□□□□ -1.8
LDB2O43679 BX890604.2-201ENST00000427883 474 ntBASIC3.82□□□□□ -1.8
LDB2O43679 AC008065.1-201ENST00000428525 348 ntBASIC3.82□□□□□ -1.8
LDB2O43679 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
LDB2O43679 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB2O43679 DNAJC19P4-201ENST00000440115 345 ntBASIC3.82□□□□□ -1.8
LDB2O43679 PGBD4P3-201ENST00000440731 581 ntBASIC3.82□□□□□ -1.8
LDB2O43679 MTCO2P3-201ENST00000442543 421 ntBASIC3.82□□□□□ -1.8
LDB2O43679 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 AC098824.1-201ENST00000453565 980 ntBASIC3.82□□□□□ -1.8
LDB2O43679 Z82190.1-201ENST00000454534 490 ntBASIC3.82□□□□□ -1.8
LDB2O43679 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB2O43679 MTCO1P42-201ENST00000457379 726 ntBASIC3.82□□□□□ -1.8
LDB2O43679 AC087385.1-201ENST00000475062 312 ntBASIC3.82□□□□□ -1.8
LDB2O43679 TMED11P-201ENST00000479478 690 ntBASIC3.82□□□□□ -1.8
LDB2O43679 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
LDB2O43679 AP001025.2-201ENST00000490908 477 ntBASIC3.82□□□□□ -1.8
LDB2O43679 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB2O43679 TXNP6-201ENST00000510190 310 ntBASIC3.82□□□□□ -1.8
LDB2O43679 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 AC136619.2-201ENST00000563361 631 ntBASIC3.82□□□□□ -1.8
LDB2O43679 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB2O43679 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 AC115621.1-201ENST00000604653 858 ntBASIC3.82□□□□□ -1.8
LDB2O43679 AC245389.1-201ENST00000605141 529 ntBASIC3.82□□□□□ -1.8
LDB2O43679 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 MIR486-1-201ENST00000612171 68 ntBASIC3.82□□□□□ -1.8
LDB2O43679 U6atac.1-201ENST00000616025 117 ntBASIC3.82□□□□□ -1.8
LDB2O43679 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 FP236240.3-201ENST00000623061 327 ntBASIC3.82□□□□□ -1.8
LDB2O43679 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB2O43679 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.81□□□□□ -1.8
LDB2O43679 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LDB2O43679 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
LDB2O43679 RN7SKP44-201ENST00000363602 316 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AL133412.1-201ENST00000380194 2992 ntBASIC3.81□□□□□ -1.8
LDB2O43679 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
LDB2O43679 RPS3AP3-201ENST00000411933 242 ntBASIC3.81□□□□□ -1.8
LDB2O43679 RPL31P45-201ENST00000419532 356 ntBASIC3.81□□□□□ -1.8
LDB2O43679 MTCYBP5-201ENST00000423752 1135 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB2O43679 AL590233.1-201ENST00000430017 456 ntBASIC3.81□□□□□ -1.8
LDB2O43679 BX276092.4-201ENST00000452056 248 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB2O43679 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 ACTR3P3-201ENST00000480448 893 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC034222.1-201ENST00000494052 532 ntBASIC3.81□□□□□ -1.8
LDB2O43679 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
LDB2O43679 NDUFB4P2-201ENST00000509515 391 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB2O43679 RNU6-1003P-201ENST00000517099 105 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB2O43679 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB2O43679 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB2O43679 MIR5685-201ENST00000579080 79 ntBASIC3.81□□□□□ -1.8
LDB2O43679 MIR4429-201ENST00000580105 73 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB2O43679 AC009977.1-201ENST00000586015 570 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.81□□□□□ -1.8
LDB2O43679 AC067852.4-201ENST00000590314 478 ntBASIC3.81□□□□□ -1.8
LDB2O43679 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB2O43679 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB2O43679 AL359999.1-201ENST00000604513 294 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC090578.1-201ENST00000604955 591 ntBASIC3.81□□□□□ -1.8
LDB2O43679 SNORA62.6-201ENST00000606322 83 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC103710.1-201ENST00000610003 901 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AC091834.1-201ENST00000614543 472 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AL160394.1-201ENST00000624765 724 ntBASIC3.81□□□□□ -1.8
LDB2O43679 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB2O43679 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB2O43679 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB2O43679 MTND5P26-201ENST00000426018 1752 ntBASIC3.81□□□□□ -1.8
LDB2O43679 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB2O43679 AC092447.10-201ENST00000620607 1652 ntBASIC3.81□□□□□ -1.8
LDB2O43679 AL049780.3-201ENST00000624612 1583 ntBASIC3.8□□□□□ -1.8
LDB2O43679 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.8□□□□□ -1.8
LDB2O43679 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 CCT4P2-201ENST00000233836 1548 ntBASIC3.8□□□□□ -1.8
LDB2O43679 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB2O43679 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms