Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.26□□□□□ -1.73
PROM1O43490 AC006065.5-201ENST00000623427 349 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC006065.6-201ENST00000625201 545 ntBASIC4.26□□□□□ -1.73
PROM1O43490 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 AC139769.1-204ENST00000472297 1931 ntBASIC4.26□□□□□ -1.73
PROM1O43490 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 AC092447.10-201ENST00000620607 1652 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC139713.2-214ENST00000642059 1811 ntBASIC4.25□□□□□ -1.73
PROM1O43490 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PROM1O43490 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PROM1O43490 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.25□□□□□ -1.73
PROM1O43490 AC097714.1-201ENST00000511272 1647 ntBASIC4.25□□□□□ -1.73
PROM1O43490 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PROM1O43490 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PROM1O43490 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PROM1O43490 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PROM1O43490 FRG1BP-201ENST00000278882 761 ntBASIC4.25□□□□□ -1.73
PROM1O43490 RNU6-1207P-201ENST00000384343 107 ntBASIC4.25□□□□□ -1.73
PROM1O43490 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.25□□□□□ -1.73
PROM1O43490 UQCRBP1-201ENST00000421129 336 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AC004975.1-201ENST00000428733 208 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AL590233.1-201ENST00000430017 456 ntBASIC4.25□□□□□ -1.73
PROM1O43490 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.25□□□□□ -1.73
PROM1O43490 UBDP1-202ENST00000457888 382 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.25□□□□□ -1.73
PROM1O43490 MTCYBP18-201ENST00000501056 747 ntBASIC4.25□□□□□ -1.73
PROM1O43490 NUP58P1-201ENST00000502546 1738 ntBASIC4.25□□□□□ -1.73
PROM1O43490 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.25□□□□□ -1.73
PROM1O43490 Vault.1-201ENST00000516474 102 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.25□□□□□ -1.73
PROM1O43490 AP000907.2-201ENST00000530827 353 ntBASIC4.25□□□□□ -1.73
PROM1O43490 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.25□□□□□ -1.73
PROM1O43490 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.25□□□□□ -1.73
PROM1O43490 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.25□□□□□ -1.73
PROM1O43490 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.25□□□□□ -1.73
PROM1O43490 AC009101.1-201ENST00000568135 242 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.25□□□□□ -1.73
PROM1O43490 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
PROM1O43490 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.25□□□□□ -1.73
PROM1O43490 AC091953.2-201ENST00000623979 160 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AP003400.5-201ENST00000624827 617 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AC068724.3-201ENST00000625906 87 ntBASIC4.25□□□□□ -1.73
PROM1O43490 AC099654.10-201ENST00000640395 161 ntBASIC4.25□□□□□ -1.73
PROM1O43490 OR52H1-202ENST00000641796 1061 ntBASIC4.25□□□□□ -1.73
PROM1O43490 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PROM1O43490 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PROM1O43490 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PROM1O43490 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
PROM1O43490 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.25□□□□□ -1.73
PROM1O43490 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PROM1O43490 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PROM1O43490 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 Y_RNA.159-201ENST00000363674 87 ntBASIC4.24□□□□□ -1.73
PROM1O43490 RNU6-1243P-201ENST00000364028 107 ntBASIC4.24□□□□□ -1.73
PROM1O43490 RNU6-1322P-201ENST00000364309 107 ntBASIC4.24□□□□□ -1.73
PROM1O43490 Y_RNA.813-201ENST00000364639 102 ntBASIC4.24□□□□□ -1.73
PROM1O43490 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 RNU1-63P-201ENST00000383902 164 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 AC092832.1-201ENST00000422934 400 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC007283.2-201ENST00000424739 197 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AL513185.2-201ENST00000425543 193 ntBASIC4.24□□□□□ -1.73
PROM1O43490 RPL7P52-201ENST00000449200 742 ntBASIC4.24□□□□□ -1.73
PROM1O43490 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 BX276092.4-201ENST00000452056 248 ntBASIC4.24□□□□□ -1.73
PROM1O43490 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 NUTF2P7-201ENST00000453086 375 ntBASIC4.24□□□□□ -1.73
PROM1O43490 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.24□□□□□ -1.73
PROM1O43490 RNU6-420P-201ENST00000458780 107 ntBASIC4.24□□□□□ -1.73
PROM1O43490 snoU13.8-201ENST00000458890 104 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC012158.1-204ENST00000483430 465 ntBASIC4.24□□□□□ -1.73
PROM1O43490 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 OR5H5P-201ENST00000503164 928 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 MTND3P22-201ENST00000510932 243 ntBASIC4.24□□□□□ -1.73
PROM1O43490 RNU4-60P-201ENST00000517239 135 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 CENPUP1-201ENST00000526649 1202 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC100770.1-201ENST00000532310 322 ntBASIC4.24□□□□□ -1.73
PROM1O43490 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.24□□□□□ -1.73
PROM1O43490 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 GLYCAM1-201ENST00000546596 285 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC123904.3-201ENST00000547218 814 ntBASIC4.24□□□□□ -1.73
PROM1O43490 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PROM1O43490 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 AC084783.1-201ENST00000565846 910 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AL356432.3-201ENST00000568952 465 ntBASIC4.24□□□□□ -1.73
PROM1O43490 MIR3118-1-201ENST00000581787 76 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.24□□□□□ -1.73
PROM1O43490 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.24□□□□□ -1.73
PROM1O43490 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 AC005255.1-201ENST00000593748 216 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms