Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPS3AP14-201ENST00000483907 780 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 RPS15AP36-201ENST00000492022 382 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC068305.1-201ENST00000497406 726 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC025554.1-201ENST00000505641 188 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 PARP4P3-201ENST00000510265 317 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 SAP18P1-201ENST00000512058 390 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 CCNG2P1-201ENST00000549521 1000 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 AC010928.3-201ENST00000587712 541 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 RPL12P25-202ENST00000598100 674 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 MLECP1-201ENST00000615893 709 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AL603758.1-201ENST00000618654 241 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.23□□□□□ -1.73
PHGDHO43175 AC015967.1-201ENST00000619893 476 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 RMST_9.1-201ENST00000619945 193 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC067931.1-201ENST00000624190 671 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.23□□□□□ -1.73
PHGDHO43175 OR56B2P-202ENST00000641377 2453 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 DDX10P1-201ENST00000448545 1933 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.23□□□□□ -1.73
PHGDHO43175 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PHGDHO43175 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
PHGDHO43175 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.22□□□□□ -1.73
PHGDHO43175 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.22□□□□□ -1.73
PHGDHO43175 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.22□□□□□ -1.73
PHGDHO43175 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PHGDHO43175 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PHGDHO43175 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PHGDHO43175 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PHGDHO43175 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PHGDHO43175 OR52B1P-201ENST00000316506 909 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC079741.1-201ENST00000321498 212 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 OR4G2P-201ENST00000328113 903 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 Y_RNA.1-201ENST00000352915 104 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PHGDHO43175 RNU6-223P-201ENST00000362830 107 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 MIR181A1-201ENST00000385026 110 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 MTCO3P40-201ENST00000392516 676 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 SNORA11B-201ENST00000408175 129 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 RNA5SP107-201ENST00000411358 122 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC119751.6-201ENST00000416712 186 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 EIF1P3-201ENST00000423841 334 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 DPPA2P1-201ENST00000428060 556 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 RPL23AP1-201ENST00000428990 471 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AL359073.1-201ENST00000448036 403 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC132479.1-201ENST00000449160 144 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AL513533.1-201ENST00000453728 415 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 RPL38P1-201ENST00000460914 211 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 RPL23AP2-201ENST00000471227 466 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PHGDHO43175 AC023194.1-201ENST00000493084 308 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC139783.2-201ENST00000504847 1145 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 RNU6-64P-201ENST00000517119 105 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 RNU6-1220P-201ENST00000517126 108 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 CDH12P4-201ENST00000517835 295 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 CDH12P3-201ENST00000517935 295 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 CDH12P1-201ENST00000518435 295 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.22□□□□□ -1.73
PHGDHO43175 AC011979.2-201ENST00000527568 352 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.22□□□□□ -1.73
PHGDHO43175 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.22□□□□□ -1.73
PHGDHO43175 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.22□□□□□ -1.73
PHGDHO43175 SUB1P2-201ENST00000556401 297 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 BNIP3P5-201ENST00000562290 498 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC113403.1-201ENST00000604910 193 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AL136363.1-201ENST00000605349 337 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AC012603.1-201ENST00000606424 528 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 uc_338.13-201ENST00000618243 179 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AL023881.1-201ENST00000621088 301 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 AL445363.3-201ENST00000623080 671 ntBASIC4.22□□□□□ -1.73
PHGDHO43175 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.22□□□□□ -1.73
PHGDHO43175 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PHGDHO43175 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PHGDHO43175 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.21□□□□□ -1.73
PHGDHO43175 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PHGDHO43175 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.21□□□□□ -1.74
PHGDHO43175 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.21□□□□□ -1.74
PHGDHO43175 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PHGDHO43175 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.21□□□□□ -1.74
PHGDHO43175 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PHGDHO43175 RNU5E-8P-201ENST00000363502 116 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 RNA5SP505-201ENST00000364748 108 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 RNU6-1103P-201ENST00000384150 107 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 RNU6-1181P-201ENST00000384191 106 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 MIR129-1-201ENST00000384972 72 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PHGDHO43175 SNORA11F-201ENST00000408237 128 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 AL356387.2-201ENST00000422272 243 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms