Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL450992.3-201ENST00000413192 568 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC109780.2-201ENST00000413467 845 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AL356583.2-201ENST00000426536 280 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 Z93242.1-201ENST00000427102 353 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXN1O15353 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN1O15353 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN1O15353 AC010469.1-201ENST00000463864 576 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.7□□□□□ -1.66
FOXN1O15353 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN1O15353 RPS29P25-201ENST00000481709 171 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 RPL7P38-201ENST00000488396 739 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC011352.3-201ENST00000505162 593 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN1O15353 AF131216.2-201ENST00000512316 564 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXN1O15353 MTCO1P30-201ENST00000515244 580 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AP000859.1-201ENST00000525536 307 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AF235103.2-201ENST00000525753 346 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 FAM92A1P1-201ENST00000528023 890 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC007458.1-201ENST00000542812 373 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC122134.1-201ENST00000565664 1104 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC110743.1-201ENST00000584870 478 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 BNIP3P8-201ENST00000597863 560 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AP001429.1-201ENST00000602568 530 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC136601.2-201ENST00000604356 474 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 AC008250.2-201ENST00000615261 205 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
FOXN1O15353 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
FOXN1O15353 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.7□□□□□ -1.66
FOXN1O15353 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN1O15353 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN1O15353 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN1O15353 RNU6-666P-201ENST00000363499 107 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 RNU6-1339P-201ENST00000363574 91 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN1O15353 RNU6-452P-201ENST00000384406 107 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 Y_RNA.548-201ENST00000384656 105 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 RPS3AP36-201ENST00000398190 775 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 UBA52P6-201ENST00000399822 382 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 MIR1302-11-201ENST00000408051 138 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 MIR1302-9-201ENST00000408365 138 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 SNORA3.3-201ENST00000408712 125 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 MIR1302-10-201ENST00000408734 138 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN1O15353 USP9YP27-201ENST00000418455 438 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN1O15353 FTLP19-201ENST00000433300 394 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 ELOCP18-201ENST00000434209 337 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN1O15353 NDUFA5P4-201ENST00000436704 385 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 snoU109.1-201ENST00000459339 135 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC092757.1-201ENST00000467293 467 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 HMGN1P13-201ENST00000505795 138 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC105914.1-201ENST00000511798 226 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 SNORA18.6-201ENST00000516792 115 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN1O15353 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXN1O15353 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN1O15353 AC063950.1-201ENST00000552036 308 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AL157687.1-201ENST00000554853 619 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN1O15353 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN1O15353 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN1O15353 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN1O15353 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN1O15353 BDH2P1-201ENST00000602288 736 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC010200.2-201ENST00000605098 235 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 MIR1302-2-201ENST00000607096 138 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC103710.1-201ENST00000610003 901 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC002550.2-201ENST00000621246 394 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC090574.1-201ENST00000623186 233 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AC068880.5-201ENST00000624331 290 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AL365361.1-201ENST00000566942 3481 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN1O15353 BDP1P-201ENST00000582658 1990 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 AL049781.1-201ENST00000623195 3585 ntBASIC4.69□□□□□ -1.66
FOXN1O15353 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN1O15353 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN1O15353 AL031985.3-201ENST00000565390 2449 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
FOXN1O15353 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN1O15353 Y_RNA.279-201ENST00000364763 95 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 Y_RNA.326-201ENST00000365176 113 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms