Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.08□□□□□ -1.92
CHD1O14646 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CHD1O14646 RN7SL622P-201ENST00000585292 275 ntBASIC3.08□□□□□ -1.92
CHD1O14646 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD1O14646 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.08□□□□□ -1.92
CHD1O14646 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD1O14646 AL139811.1-201ENST00000424779 2299 ntBASIC3.08□□□□□ -1.92
CHD1O14646 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHD1O14646 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.08□□□□□ -1.92
CHD1O14646 RNA5SP325-201ENST00000363756 130 ntBASIC3.07□□□□□ -1.92
CHD1O14646 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.07□□□□□ -1.92
CHD1O14646 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.07□□□□□ -1.92
CHD1O14646 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.07□□□□□ -1.92
CHD1O14646 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD1O14646 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.07□□□□□ -1.92
CHD1O14646 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
CHD1O14646 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.07□□□□□ -1.92
CHD1O14646 MUPP-201ENST00000438111 566 ntBASIC3.07□□□□□ -1.92
CHD1O14646 MTAPP1-201ENST00000489154 819 ntBASIC3.07□□□□□ -1.92
CHD1O14646 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.07□□□□□ -1.92
CHD1O14646 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD1O14646 OR8X1P-201ENST00000534542 869 ntBASIC3.07□□□□□ -1.92
CHD1O14646 MTCO3P13-201ENST00000577757 781 ntBASIC3.07□□□□□ -1.92
CHD1O14646 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.07□□□□□ -1.92
CHD1O14646 API5P2-201ENST00000397055 1498 ntBASIC3.07□□□□□ -1.92
CHD1O14646 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CHD1O14646 MTND5P35-201ENST00000557537 1720 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AC233981.2-201ENST00000611524 1614 ntBASIC3.06□□□□□ -1.92
CHD1O14646 HSPE1P26-201ENST00000405341 275 ntBASIC3.06□□□□□ -1.92
CHD1O14646 MIR1294-201ENST00000408503 142 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD1O14646 RPL7P31-201ENST00000450192 724 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD1O14646 AC067805.1-201ENST00000559344 470 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD1O14646 TPMTP1-201ENST00000592307 737 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AL353748.2-201ENST00000622148 471 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHD1O14646 AC132825.8-201ENST00000640783 297 ntBASIC3.06□□□□□ -1.92
CHD1O14646 AC011978.2-201ENST00000569835 2054 ntBASIC3.06□□□□□ -1.92
CHD1O14646 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD1O14646 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHD1O14646 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.05□□□□□ -1.92
CHD1O14646 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD1O14646 NEK4P1-201ENST00000433383 879 ntBASIC3.05□□□□□ -1.92
CHD1O14646 AL445669.2-201ENST00000454425 421 ntBASIC3.05□□□□□ -1.92
CHD1O14646 RPS15AP17-201ENST00000470598 390 ntBASIC3.05□□□□□ -1.92
CHD1O14646 AC012170.1-201ENST00000495139 359 ntBASIC3.05□□□□□ -1.92
CHD1O14646 ATG10-AS1-201ENST00000504846 648 ntBASIC3.05□□□□□ -1.92
CHD1O14646 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.05□□□□□ -1.92
CHD1O14646 AL035411.2-201ENST00000604022 421 ntBASIC3.05□□□□□ -1.92
CHD1O14646 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHD1O14646 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
CHD1O14646 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD1O14646 DCAF13P1-201ENST00000495256 1330 ntBASIC3.05□□□□□ -1.92
CHD1O14646 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHD1O14646 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHD1O14646 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.05□□□□□ -1.92
CHD1O14646 DEFA7P-201ENST00000382676 285 ntBASIC3.05□□□□□ -1.92
CHD1O14646 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD1O14646 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
CHD1O14646 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.05□□□□□ -1.92
CHD1O14646 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.05□□□□□ -1.92
CHD1O14646 AC007620.3-201ENST00000608131 497 ntBASIC3.05□□□□□ -1.92
CHD1O14646 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHD1O14646 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.04□□□□□ -1.92
CHD1O14646 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHD1O14646 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.04□□□□□ -1.92
CHD1O14646 MIR613-201ENST00000385248 95 ntBASIC3.04□□□□□ -1.92
CHD1O14646 AL096701.2-201ENST00000416920 238 ntBASIC3.04□□□□□ -1.92
CHD1O14646 SNRPGP3-201ENST00000469405 227 ntBASIC3.04□□□□□ -1.92
CHD1O14646 IGLV3-17-201ENST00000519099 244 ntBASIC3.04□□□□□ -1.92
CHD1O14646 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.04□□□□□ -1.92
CHD1O14646 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.04□□□□□ -1.92
CHD1O14646 MIR3199-1-201ENST00000582434 88 ntBASIC3.04□□□□□ -1.92
CHD1O14646 HMGB1P13-201ENST00000406019 642 ntBASIC3.03□□□□□ -1.92
CHD1O14646 AC092832.1-201ENST00000422934 400 ntBASIC3.03□□□□□ -1.92
CHD1O14646 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.03□□□□□ -1.92
CHD1O14646 RPS27P5-201ENST00000444247 244 ntBASIC3.03□□□□□ -1.92
CHD1O14646 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.03□□□□□ -1.92
CHD1O14646 MIR8081-201ENST00000611533 95 ntBASIC3.03□□□□□ -1.92
CHD1O14646 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.02□□□□□ -1.93
CHD1O14646 SAR1AP2-201ENST00000392696 594 ntBASIC3.02□□□□□ -1.93
CHD1O14646 AC234782.4-201ENST00000417646 1048 ntBASIC3.02□□□□□ -1.93
CHD1O14646 MTCO3P30-201ENST00000426425 670 ntBASIC3.02□□□□□ -1.93
CHD1O14646 TOMM22P6-201ENST00000465035 409 ntBASIC3.02□□□□□ -1.93
CHD1O14646 AP000889.2-201ENST00000532684 490 ntBASIC3.02□□□□□ -1.93
CHD1O14646 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.02□□□□□ -1.93
CHD1O14646 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.02□□□□□ -1.93
CHD1O14646 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHD1O14646 AL138799.3-201ENST00000438968 350 ntBASIC3.02□□□□□ -1.93
CHD1O14646 TMEM248P1-201ENST00000510579 951 ntBASIC3.02□□□□□ -1.93
CHD1O14646 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.02□□□□□ -1.93
CHD1O14646 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.02□□□□□ -1.93
CHD1O14646 AL355578.1-201ENST00000607405 1328 ntBASIC3.02□□□□□ -1.93
CHD1O14646 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHD1O14646 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHD1O14646 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD1O14646 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHD1O14646 AC114546.3-201ENST00000623582 1734 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms