Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR4435-1-201ENST00000582552 80 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGN4O00479 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGN4O00479 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGN4O00479 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGN4O00479 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMGN4O00479 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HMGN4O00479 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HMGN4O00479 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HMGN4O00479 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGN4O00479 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGN4O00479 AC091564.4-201ENST00000533934 2194 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 AC138915.1-201ENST00000565427 1685 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HMGN4O00479 Y_RNA.111-201ENST00000363248 100 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 MORF4L1P6-201ENST00000418771 268 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGN4O00479 MTATP6P4-201ENST00000427725 675 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 AC236972.1-201ENST00000433225 199 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMGN4O00479 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGN4O00479 Z99714.1-201ENST00000450463 807 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 TPMTP4-201ENST00000450749 678 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.75□□□□□ -2.13
HMGN4O00479 RNU7-27P-201ENST00000459281 62 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.75□□□□□ -2.13
HMGN4O00479 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 OR52A4P-203ENST00000498233 1014 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMGN4O00479 AC009901.1-201ENST00000506703 541 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGN4O00479 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGN4O00479 AP000790.1-201ENST00000528891 737 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGN4O00479 AC105036.1-201ENST00000566222 271 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGN4O00479 AC092881.1-201ENST00000638218 2733 ntBASIC1.75□□□□□ -2.13
HMGN4O00479 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGN4O00479 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGN4O00479 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMGN4O00479 NACA3P-201ENST00000359690 648 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 RNU6-697P-201ENST00000363348 107 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 RNA5SP88-201ENST00000365560 109 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 RNU6-1027P-201ENST00000383998 107 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 RNU6-532P-201ENST00000384318 107 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 AL445529.1-201ENST00000398713 389 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 RNU4-65P-201ENST00000410473 140 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 SMC4P1-201ENST00000414479 527 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGN4O00479 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 MTCYBP45-201ENST00000435243 565 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 UBE2D3P1-201ENST00000436669 444 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 RPS29P12-201ENST00000460178 152 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 AC087879.1-201ENST00000474343 374 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 RPL38P4-201ENST00000502376 214 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGN4O00479 ANXA2P1-201ENST00000505539 926 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 RNA5SP468-201ENST00000516782 93 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 HSPE1P18-201ENST00000517602 280 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGN4O00479 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGN4O00479 MIR4448-201ENST00000584360 86 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGN4O00479 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMGN4O00479 MIR4496-201ENST00000635896 61 ntBASIC1.74□□□□□ -2.13
HMGN4O00479 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGN4O00479 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGN4O00479 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGN4O00479 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGN4O00479 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 RN7SKP192-201ENST00000411291 327 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 HMGN2P30-201ENST00000423237 256 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 HMGN2P38-201ENST00000423806 265 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGN4O00479 HMGN2P19-201ENST00000425149 265 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AL035407.1-201ENST00000429211 571 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 PTP4A1P3-201ENST00000433661 420 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGN4O00479 LSM1P1-201ENST00000438629 273 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC234775.1-201ENST00000454247 670 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGN4O00479 RPL30P9-201ENST00000465586 330 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC007182.2-201ENST00000489251 402 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC008716.1-201ENST00000511084 513 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGN4O00479 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGN4O00479 NBEAP1-201ENST00000554452 979 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGN4O00479 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGN4O00479 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGN4O00479 AL133507.1-201ENST00000605269 557 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 MIR6895-201ENST00000613497 78 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AL110115.1-201ENST00000614396 364 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC002064.3-201ENST00000623448 346 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms