Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 SNRPEP7-201ENST00000438350 220 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 THAP5P1-201ENST00000439089 262 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC092641.1-201ENST00000440229 772 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 CR769776.1-201ENST00000441254 787 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 FGF7P5-201ENST00000441829 291 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 RPL21P23-201ENST00000446654 460 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 OR6K5P-201ENST00000447050 945 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 RPL7P23-201ENST00000493874 747 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AC022483.1-201ENST00000514020 567 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 MTND2P32-201ENST00000521584 1038 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC022690.1-201ENST00000526681 550 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 TRAV37-201ENST00000553906 342 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AP000484.1-201ENST00000620067 1252 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC243312.2-201ENST00000623340 601 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC28A1O00337 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC28A1O00337 AC005183.1-201ENST00000603687 1979 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC009812.4-201ENST00000569134 1805 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 MTCO1P9-201ENST00000505577 1534 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC28A1O00337 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AL161781.1-201ENST00000354277 403 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 U3.42-201ENST00000408746 214 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 RAB9AP3-201ENST00000412737 573 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 SYF2P2-201ENST00000417620 583 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC006960.1-201ENST00000419980 153 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 SNRPEP4-201ENST00000435815 279 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC28A1O00337 RPL17P49-201ENST00000443728 411 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AL606517.1-201ENST00000446914 387 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 RAB9AP1-201ENST00000449393 573 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC115115.1-201ENST00000449927 248 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC104563.1-201ENST00000476147 376 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 RNU6-528P-201ENST00000516926 100 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 RNU6-714P-201ENST00000516963 103 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 ERHP1-201ENST00000523006 310 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC28A1O00337 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC005476.1-201ENST00000554427 397 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 VN1R82P-201ENST00000601481 356 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AL592221.1-201ENST00000605266 382 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC008962.1-201ENST00000605729 304 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC068831.7-201ENST00000616954 363 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC002550.2-201ENST00000621246 394 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC011330.2-201ENST00000621680 635 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC068787.1-201ENST00000623908 691 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC28A1O00337 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.18□□□□□ -1.9
SLC28A1O00337 AC244258.1-201ENST00000637553 1071 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC006927.4-201ENST00000639187 543 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC28A1O00337 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SLC28A1O00337 SRP72P2-201ENST00000344851 1979 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
SLC28A1O00337 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC28A1O00337 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC28A1O00337 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC28A1O00337 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC28A1O00337 MIR218-2-201ENST00000385006 110 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 RPS3AP24-201ENST00000407896 734 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms