Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3B1O00203 RAC1P8-201ENST00000427086 527 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 AC005300.1-201ENST00000428401 373 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RPL17P35-201ENST00000432217 549 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3B1O00203 AC092393.1-201ENST00000439625 742 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 BTBD7P2-201ENST00000441962 620 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RPL23AP20-201ENST00000447965 421 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 AL672167.3-201ENST00000465951 960 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RPL31P60-201ENST00000478450 367 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.05□□□□□ -1.92
AP3B1O00203 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.05□□□□□ -1.92
AP3B1O00203 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3B1O00203 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
AP3B1O00203 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3B1O00203 BNIP3P24-201ENST00000593398 557 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RPAP2P1-201ENST00000603626 1168 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 CYCSP41-201ENST00000616920 296 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 AC011330.2-201ENST00000621680 635 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
AP3B1O00203 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
AP3B1O00203 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.04□□□□□ -1.92
AP3B1O00203 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
AP3B1O00203 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
AP3B1O00203 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.04□□□□□ -1.92
AP3B1O00203 SNORD67-201ENST00000390833 111 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.04□□□□□ -1.92
AP3B1O00203 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.04□□□□□ -1.92
AP3B1O00203 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3B1O00203 AL591503.2-201ENST00000442314 1005 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3B1O00203 PNPLA4P1-201ENST00000458328 305 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3B1O00203 AC118282.1-201ENST00000506408 765 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 AC027309.2-201ENST00000520566 192 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 MTCO1P47-201ENST00000523889 1271 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 CASP1P1-201ENST00000526345 212 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.04□□□□□ -1.92
AP3B1O00203 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3B1O00203 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3B1O00203 AC034105.3-201ENST00000565294 442 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3B1O00203 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.04□□□□□ -1.92
AP3B1O00203 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.04□□□□□ -1.92
AP3B1O00203 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.04□□□□□ -1.92
AP3B1O00203 MIR6075-201ENST00000620782 95 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 AC010338.1-201ENST00000621823 717 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 AC073348.1-201ENST00000623002 331 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
AP3B1O00203 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
AP3B1O00203 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
AP3B1O00203 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC073325.2-201ENST00000339545 159 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RNU6-1180P-201ENST00000364935 107 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RNU6-198P-201ENST00000384258 104 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 MIR217-201ENST00000384817 110 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RNA5SP354-201ENST00000391247 136 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RNU2-47P-201ENST00000410649 186 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.03□□□□□ -1.92
AP3B1O00203 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.03□□□□□ -1.92
AP3B1O00203 Z93242.1-201ENST00000427102 353 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AL512637.2-201ENST00000431287 1256 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.03□□□□□ -1.92
AP3B1O00203 RPL23AP74-201ENST00000437246 471 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.03□□□□□ -1.92
AP3B1O00203 MTND4P15-201ENST00000437913 1033 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 LSM1P1-201ENST00000438629 273 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.03□□□□□ -1.92
AP3B1O00203 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
AP3B1O00203 RPL27AP5-201ENST00000469428 449 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RPS29P2-201ENST00000479278 136 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.03□□□□□ -1.92
AP3B1O00203 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.03□□□□□ -1.92
AP3B1O00203 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
AP3B1O00203 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.03□□□□□ -1.92
AP3B1O00203 CCNG2P1-201ENST00000549521 1000 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC105224.1-201ENST00000587055 421 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.03□□□□□ -1.92
AP3B1O00203 AL035411.2-201ENST00000604022 421 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AP000238.1-201ENST00000608759 426 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AL359198.2-201ENST00000611836 194 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 DUXAP10-204ENST00000612052 616 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC004852.3-201ENST00000614131 326 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AL118556.2-201ENST00000614375 824 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC025588.4-201ENST00000615802 908 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.03□□□□□ -1.92
AP3B1O00203 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.03□□□□□ -1.92
AP3B1O00203 AC091948.2-201ENST00000636510 279 ntBASIC3.03□□□□□ -1.92
AP3B1O00203 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
AP3B1O00203 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
AP3B1O00203 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
AP3B1O00203 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
AP3B1O00203 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.02□□□□□ -1.93
AP3B1O00203 AC092447.7-201ENST00000422212 1621 ntBASIC3.02□□□□□ -1.93
AP3B1O00203 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
AP3B1O00203 RNU1-105P-201ENST00000363470 161 ntBASIC3.02□□□□□ -1.93
AP3B1O00203 RNU6-657P-201ENST00000383904 107 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms