Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 HMGB1P14-201ENST00000557424 591 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC090888.3-201ENST00000558917 509 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC135628.1-201ENST00000568867 534 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 MIR4504-201ENST00000577413 92 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC005412.1-201ENST00000580812 1049 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 FAM60CP-201ENST00000591086 664 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC022916.3-201ENST00000592961 742 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC002487.1-201ENST00000604565 994 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 DPRXP5-201ENST00000604662 539 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC020658.4-201ENST00000613987 684 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC006338.2-201ENST00000616864 791 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 OR1S1-201ENST00000624470 978 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC004520.1-201ENST00000608362 1413 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC069528.2-201ENST00000624849 1991 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 CCT4P2-201ENST00000233836 1548 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RNA5SP72-201ENST00000364442 117 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-1074P-201ENST00000383995 104 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-761P-201ENST00000384148 107 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA11C-201ENST00000408532 129 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RNA5SP21-201ENST00000410917 96 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 FCF1P2-201ENST00000415284 583 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC099677.1-201ENST00000420575 175 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC018644.1-201ENST00000429934 551 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL035246.1-201ENST00000433554 1255 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 SDCBPP1-201ENST00000440192 890 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 FGF7P5-201ENST00000441829 291 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RPS24P13-201ENST00000442520 397 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC112653.1-201ENST00000443851 386 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 PMCHL2-203ENST00000457791 237 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RN7SL610P-201ENST00000463845 291 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RPL23AP42-201ENST00000471152 471 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC072039.1-201ENST00000477611 581 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC093663.2-201ENST00000484625 313 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RN7SL504P-201ENST00000494496 287 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC105252.1-201ENST00000503089 286 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 OR5H5P-201ENST00000503164 928 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RNA5SP282-201ENST00000516355 108 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 RNA5SP24-201ENST00000516478 95 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC010306.1-201ENST00000523223 1117 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AP003102.1-201ENST00000525638 661 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 MIR5680-201ENST00000577577 84 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 FAM60BP-201ENST00000578364 658 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 LRRC37A5P-203ENST00000580181 585 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC022662.1-201ENST00000580252 331 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC061975.8-201ENST00000587058 721 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC040174.2-201ENST00000602701 465 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL606834.2-201ENST00000602954 668 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC079880.2-201ENST00000603790 1213 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC009314.1-201ENST00000603871 304 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AL355297.2-201ENST00000604792 129 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AP004372.1-201ENST00000604842 844 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 MTND4P27-201ENST00000450813 1354 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 MTND4P8-201ENST00000514997 1362 ntBASIC1.21□□□□□ -2.22
CHKB-CPT1BH3BT56 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 U8.14-201ENST00000390843 143 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-220P-201ENST00000390919 107 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AL591416.1-201ENST00000404015 867 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 MORN2-202ENST00000409077 465 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms