Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 XGY1-201ENST00000381172 446 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 MIR524-201ENST00000385242 87 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 RNA5SP171-201ENST00000391071 115 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 BTF3P7-201ENST00000407097 488 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 MTCYBP24-201ENST00000420387 1106 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 MTCYBP45-201ENST00000435243 565 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 Z77249.1-201ENST00000444622 1175 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC113155.1-201ENST00000511141 769 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC006499.2-201ENST00000513470 337 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 FAM92A1P1-201ENST00000528023 890 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC020763.5-201ENST00000623298 430 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AL356266.1-201ENST00000623311 483 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 ZNF37BP-203ENST00000452306 1352 ntBASIC1.85□□□□□ -2.11
TCRBV3S1A0A5B6 AC011460.1-201ENST00000636268 1834 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC006020.1-201ENST00000420179 1854 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 U3.12-201ENST00000364498 214 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 RNU6-1293P-201ENST00000384077 107 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 MIR128-1-201ENST00000384921 82 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC025750.2-201ENST00000442609 450 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 RNA5SP310-201ENST00000459084 116 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC015908.1-201ENST00000478739 476 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 CCNHP1-201ENST00000513311 678 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 MIR4658-201ENST00000584344 65 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 RNU6-156P-201ENST00000621869 107 ntBASIC1.84□□□□□ -2.11
TCRBV3S1A0A5B6 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
TCRBV3S1A0A5B6 AL049737.1-201ENST00000413920 1403 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 RNA5SP289-201ENST00000362332 137 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 SNORA6-201ENST00000384033 151 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 RNU6-1072P-201ENST00000384703 107 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 RNU6-443P-201ENST00000384780 107 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 SNORA11.4-201ENST00000408823 129 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 SYPL1P1-201ENST00000473622 768 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 RPL30P14-201ENST00000482744 348 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 RPS3AP14-201ENST00000483907 780 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AMZ2P1-203ENST00000565833 850 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC090525.3-201ENST00000605601 189 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AP001521.1-201ENST00000609150 300 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC106028.5-201ENST00000610332 395 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 AC010378.1-201ENST00000619270 362 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 ZNF519P1-201ENST00000449011 1626 ntBASIC1.83□□□□□ -2.12
TCRBV3S1A0A5B6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 RNU6-618P-201ENST00000363518 112 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 RNU1-52P-201ENST00000384190 164 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 AL356057.1-202ENST00000402263 756 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 RNU4-72P-201ENST00000410754 173 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 IFNA11P-201ENST00000446352 526 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 HMGN1P5-201ENST00000448591 263 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 MTAPP1-201ENST00000489154 819 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 MTCO3P44-201ENST00000510977 541 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 AC074029.1-201ENST00000552531 1044 ntBASIC1.82□□□□□ -2.12
TCRBV3S1A0A5B6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms