Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 SNORD82-201ENST00000365530 70 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-629P-201ENST00000384061 103 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 MT-TC-201ENST00000387405 66 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 ARF4P3-201ENST00000397387 509 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AL121972.1-201ENST00000402023 252 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AL024474.1-201ENST00000404655 591 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AP000567.1-201ENST00000406413 156 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AL583834.1-201ENST00000406943 343 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RNU4-78P-201ENST00000410940 126 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AL133384.1-201ENST00000412744 351 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RPS3AP37-201ENST00000419176 745 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RFC5P1-201ENST00000454419 874 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RNU7-170P-201ENST00000459303 61 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RPL21P41-201ENST00000459863 264 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 VN1R17P-201ENST00000472048 1090 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC134050.1-201ENST00000495088 933 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC113347.3-201ENST00000509113 148 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC008837.2-201ENST00000513076 418 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-1261P-201ENST00000517194 104 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 COX6CP8-201ENST00000522620 226 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 MTCYBP41-201ENST00000528913 1123 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC125611.1-201ENST00000549563 229 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AADACP1-206ENST00000561502 1193 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC023813.2-201ENST00000564321 469 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 VN1R90P-201ENST00000595717 726 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AL035411.2-201ENST00000604022 421 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC016597.2-201ENST00000613256 341 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC006213.4-201ENST00000616184 634 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 AC092184.1-201ENST00000625042 715 ntBASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.05□□□□□ -1.92
SMIM28A0A1B0GU29 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 RNA5SP295-201ENST00000362655 121 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 U3.29-201ENST00000391296 212 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 RN7SKP58-201ENST00000411010 305 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 RNU2-71P-201ENST00000411395 189 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC068533.2-201ENST00000411872 306 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC007390.1-201ENST00000415722 356 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AL356320.2-201ENST00000417263 507 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 NANOGP5-201ENST00000424456 877 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 FTH1P1-201ENST00000437933 532 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC004022.1-201ENST00000447766 1066 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC093767.1-201ENST00000504523 156 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC114322.1-201ENST00000506771 926 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 TXNP6-201ENST00000510190 310 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-1225P-201ENST00000516336 65 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC008127.2-201ENST00000549925 1075 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 MIR3690-201ENST00000580266 75 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC106052.1-201ENST00000608029 497 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC231759.1-201ENST00000616455 597 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC073968.1-201ENST00000618594 637 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC007998.5-201ENST00000622938 237 ntBASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms