Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC017037.2-201ENST00000513850 890 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORA70.18-201ENST00000516696 98 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORA70.19-201ENST00000516717 90 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORA31.20-201ENST00000517111 133 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RANP9-201ENST00000519957 271 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC013828.2-201ENST00000532487 235 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL356057.1-201ENST00000533798 831 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CR383656.7-201ENST00000548164 174 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 GTF2IP22-201ENST00000554443 182 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PCMTD1P2-201ENST00000565017 355 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC012182.1-201ENST00000570133 895 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MIR4443-201ENST00000585052 53 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 BNIP3P23-201ENST00000599655 511 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL590392.1-201ENST00000604960 446 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC092354.1-201ENST00000606057 376 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC103710.4-201ENST00000609301 899 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL391261.4-201ENST00000616012 481 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC006338.2-201ENST00000616864 791 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL353748.2-201ENST00000622148 471 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC091931.1-201ENST00000623488 728 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC012321.1-201ENST00000561622 1588 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FRG1CP-201ENST00000358464 769 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORA31-201ENST00000362607 130 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU6-501P-201ENST00000364072 100 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL049693.1-201ENST00000402760 611 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RN7SKP156-201ENST00000410308 342 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPS27AP14-201ENST00000422868 454 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL365184.2-201ENST00000431139 435 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC104308.1-201ENST00000454621 333 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 snoU13.24-201ENST00000458998 104 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC007537.2-201ENST00000472093 511 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC023598.1-201ENST00000472521 361 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL31P13-201ENST00000484151 370 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC034222.1-201ENST00000494052 532 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MTCO1P49-201ENST00000523429 802 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MED28P5-201ENST00000528254 438 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC091489.2-201ENST00000566263 604 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ROCK1P1-201ENST00000573767 549 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MIR4307-201ENST00000582802 84 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC008507.1-201ENST00000587506 734 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC002550.2-201ENST00000621246 394 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 U4.6-201ENST00000621618 127 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC008443.7-201ENST00000622195 246 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC091965.5-201ENST00000624785 342 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ZNF833P-201ENST00000424938 1494 ntBASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.2□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 SNORD9-201ENST00000362566 104 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC068538.1-201ENST00000376856 336 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL021407.1-201ENST00000404531 386 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PPIAP31-201ENST00000405422 495 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNA5SP31-201ENST00000411144 127 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL7P8-201ENST00000411964 730 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPS7P13-201ENST00000413955 498 ntBASIC3.19□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MTCO3P12-201ENST00000416718 547 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms