Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AC107934.2-201ENST00000518653 310 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 HSPA8P13-201ENST00000523715 472 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AC010546.1-201ENST00000569391 485 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 MIR3944-201ENST00000581277 108 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 MIR4637-201ENST00000582405 84 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AL583856.2-201ENST00000606298 543 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AL627309.6-201ENST00000606857 840 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AL450472.3-201ENST00000615578 367 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 AC090132.2-201ENST00000615881 347 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 MIR6130-201ENST00000619419 109 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV25A0A0B4J276 MTCO1P12-201ENST00000414273 1543 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 MTCO1P9-201ENST00000505577 1534 ntBASIC2.58□□□□□ -2
TRAV25A0A0B4J276 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 NACA3P-201ENST00000359690 648 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 RNU6-270P-201ENST00000364131 105 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AL136116.1-201ENST00000403591 381 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 RPL7P27-201ENST00000403775 720 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 SNORA11-201ENST00000408789 128 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 Z85995.1-201ENST00000415547 335 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 DBIP2-201ENST00000419076 262 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC009414.1-201ENST00000427200 443 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 MTCO1P3-201ENST00000429327 192 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AL714022.1-201ENST00000439897 151 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 RPS15AP27-201ENST00000449183 343 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC097262.1-201ENST00000452559 548 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 MTND2P24-201ENST00000453434 806 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC146507.2-201ENST00000460608 476 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC116337.2-201ENST00000477662 156 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 RPL23AP70-201ENST00000483361 460 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC090453.1-201ENST00000495560 436 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 WBP1LP4-201ENST00000505043 344 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AP003066.2-201ENST00000529375 555 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AP003049.1-201ENST00000529418 457 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC124947.2-202ENST00000552735 133 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 NCAPGP2-201ENST00000557911 754 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC006504.3-201ENST00000586818 523 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 BNIP3P33-201ENST00000598912 569 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC005332.6-201ENST00000613178 446 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AL356321.1-201ENST00000621360 228 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 MIR4275-201ENST00000636486 87 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 AL022578.1-201ENST00000439330 1433 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TRAV25A0A0B4J276 CR848007.1-201ENST00000442354 1699 ntBASIC2.57□□□□□ -2
TRAV25A0A0B4J276 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 RNU1-33P-201ENST00000364249 162 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 MIR183-201ENST00000384958 110 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 MIR325-201ENST00000385260 98 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 RNA5SP344-201ENST00000411081 104 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 HMGN1P24-201ENST00000412282 298 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC092634.2-201ENST00000428146 1010 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 YME1L1P1-201ENST00000429435 297 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AL159987.2-201ENST00000432754 307 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 GAPDHP27-201ENST00000447427 1020 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AL358232.1-201ENST00000448030 501 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC244505.3-201ENST00000454598 187 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 RPL21P10-201ENST00000463521 490 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC025518.1-201ENST00000479856 347 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC103975.1-201ENST00000482506 483 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.56□□□□□ -2
TRAV25A0A0B4J276 AC020893.1-201ENST00000502452 580 ntBASIC2.56□□□□□ -2
TRAV25A0A0B4J276 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms