Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 OFD1P18Y-201ENST00000420889 959 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC008280.2-201ENST00000455473 307 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 RBM43P1-201ENST00000476891 1081 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 RN7SL432P-201ENST00000484057 298 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC093663.2-201ENST00000484625 313 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 RPS15AP34-201ENST00000487776 387 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 CKS1BP7-201ENST00000522230 235 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 ISCA1P3-201ENST00000577104 373 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC090666.1-201ENST00000578241 445 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 MIR5694-201ENST00000581190 76 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 NTAN1P1-201ENST00000603150 646 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 U4.3-201ENST00000621047 82 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AP003485.2-201ENST00000623636 610 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP456-201ENST00000364002 114 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AL162578.1-201ENST00000406202 378 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 OR4K6P-201ENST00000416478 897 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 MORF4L1P6-201ENST00000418771 268 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 RPL7P30-201ENST00000420888 709 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC114973.1-201ENST00000429057 632 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC104389.3-201ENST00000445629 235 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC004924.1-201ENST00000480160 781 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 IGLV3-17-201ENST00000519099 244 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AP000867.2-201ENST00000532468 320 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 HMGB1P6-201ENST00000569046 646 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC010615.3-201ENST00000597319 394 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AP001330.4-201ENST00000604350 154 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC128687.1-201ENST00000605304 619 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AP005212.4-201ENST00000614206 710 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 CRYM-AS1-204ENST00000637983 556 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 AC104446.1-201ENST00000613728 1321 ntBASIC1.86□□□□□ -2.11
HLA-DRB4X5D2U9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RNU6-525P-201ENST00000363685 104 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RNU6-98P-201ENST00000384173 107 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AL356320.2-201ENST00000417263 507 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 MTCO2P17-201ENST00000424336 677 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 SNRPGP6-201ENST00000451124 220 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AL109933.2-201ENST00000452651 260 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RPL23AP45-201ENST00000476406 468 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RPS4XP6-201ENST00000477670 797 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC107398.1-201ENST00000486904 505 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC090096.1-201ENST00000489168 390 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RN7SKP24-201ENST00000515888 284 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC087272.1-201ENST00000523624 533 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 SUB1P1-201ENST00000524415 382 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AP000790.1-201ENST00000528891 737 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 SNRPGP16-201ENST00000533275 226 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 SERPINE4P-201ENST00000554978 281 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AP005205.1-201ENST00000563503 508 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 RPL23AP84-201ENST00000571193 464 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 HSPE1P7-201ENST00000604681 321 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AL136363.1-201ENST00000605349 337 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 AC006329.2-201ENST00000611491 394 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms