Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC116337.2-201ENST00000477662 156 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC106707.2-201ENST00000484182 374 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC005726.1-201ENST00000494679 427 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 CBX3P3-201ENST00000508108 532 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 RANP9-201ENST00000519957 271 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 OR5D17P-201ENST00000531492 978 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC006362.1-201ENST00000567392 174 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AGGF1P4-201ENST00000568249 801 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 MIR4637-201ENST00000582405 84 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC007566.2-201ENST00000603642 413 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC107214.2-201ENST00000608204 634 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC239868.4-201ENST00000608318 671 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC092656.1-203ENST00000624134 423 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 GABPAP-201ENST00000419271 1356 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 HMGB1P17-201ENST00000403495 628 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 RN7SKP142-201ENST00000411236 328 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AL133384.1-201ENST00000412744 351 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 RPL31P2-201ENST00000413849 377 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AL389915.1-201ENST00000422463 466 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 NPM1P49-201ENST00000448027 714 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 CEACAMP4-201ENST00000457676 421 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC087879.1-201ENST00000474343 374 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AL049830.2-201ENST00000480072 201 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC079140.3-201ENST00000511111 550 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 HSPE1P3-201ENST00000559254 309 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 MIR3186-201ENST00000577404 85 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 MIR4444-1-201ENST00000581696 74 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 MIR4444-2-201ENST00000584390 74 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC004987.4-201ENST00000603383 338 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 RNU6-88P-201ENST00000606801 100 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 MIR92B-201ENST00000607575 96 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC025594.3-201ENST00000613068 790 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 U73479.1-201ENST00000618062 168 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AL732618.1-201ENST00000623251 301 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 AC009093.8-201ENST00000641769 292 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 CR383658.2-201ENST00000547576 1525 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 MTND4P5-201ENST00000435821 1374 ntBASIC3.88□□□□□ -1.79
SNX9Q9Y5X1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RPS29P4-201ENST00000414733 161 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 MTCYBP24-201ENST00000420387 1106 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RPL7P30-201ENST00000420888 709 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AL365184.2-201ENST00000431139 435 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 COX6CP12-201ENST00000446748 202 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 SNORD105B-201ENST00000458770 79 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RPS15AP17-201ENST00000470598 390 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RPL31P13-201ENST00000484151 370 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 TMEM251P1-201ENST00000503717 318 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms