Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 Y_RNA.160-201ENST00000363677 92 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RNU6-288P-201ENST00000363690 104 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RN7SKP257-201ENST00000364525 309 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RNA5SP513-201ENST00000364648 118 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 PPIAP31-201ENST00000405422 495 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AL356776.1-201ENST00000406574 447 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RPL24P2-201ENST00000421023 475 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 Z74021.1-201ENST00000423610 407 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 HMGB1P12-201ENST00000438594 598 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 MTND3P16-201ENST00000452205 344 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC118758.1-202ENST00000454719 225 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RPL31P60-201ENST00000478450 367 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RPS15AP34-201ENST00000487776 387 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 RN7SL558P-201ENST00000497468 299 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 NENFP3-201ENST00000503735 313 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 PPBPP1-201ENST00000510807 373 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 CENPUP1-201ENST00000526649 1202 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AL137161.1-201ENST00000532231 390 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC106900.2-201ENST00000604994 317 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC126915.2-201ENST00000610957 190 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC245014.3-201ENST00000618589 347 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC010338.1-201ENST00000621823 717 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AC010325.3-201ENST00000641084 394 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 AL672296.1-201ENST00000427780 2158 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 BRAFP1-201ENST00000445336 2703 ntBASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GTF3C3Q9Y5Q9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AL354685.2-201ENST00000448218 1447 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 RNU4-66P-201ENST00000365199 138 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 DEFB109C-201ENST00000382575 264 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 DEFB109B-201ENST00000382656 264 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 MIR105-1-201ENST00000385222 81 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 RPL21P111-201ENST00000418453 477 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 BX323845.1-201ENST00000432417 179 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AL121601.2-201ENST00000438019 707 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC019185.1-201ENST00000442718 389 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 CBWD4P-201ENST00000445695 655 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 RBBP4P6-201ENST00000508098 202 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AL121576.1-201ENST00000556055 276 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC051619.2-201ENST00000559063 397 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 BNIP3P9-201ENST00000603714 553 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC022893.3-201ENST00000607665 437 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC020634.1-201ENST00000608701 549 ntBASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
GTF3C3Q9Y5Q9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 Y_RNA.72-201ENST00000362894 103 ntBASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 RNU6-550P-201ENST00000391057 101 ntBASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 AL591704.1-201ENST00000432574 275 ntBASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 RPL36AP53-201ENST00000432891 316 ntBASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 AL353748.1-201ENST00000440753 474 ntBASIC6.5□□□□□ -1.37
GTF3C3Q9Y5Q9 RPS4XP13-201ENST00000483219 789 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms