Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC105129.1-201ENST00000560250 297 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL034351.1-201ENST00000605288 668 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC243312.2-201ENST00000623340 601 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC092435.4-201ENST00000623012 4159 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC011266.1-201ENST00000624119 3569 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 SNORD56.2-201ENST00000363242 71 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 RNY4P14-201ENST00000363656 96 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 SNORA71.2-201ENST00000364941 134 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-282P-201ENST00000365357 103 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 Y_RNA.402-201ENST00000383972 102 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 Y_RNA.450-201ENST00000384198 113 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 RNA5SP372-201ENST00000390836 115 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 HSPD1P16-201ENST00000402302 394 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 MTATP6P18-201ENST00000417994 673 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 MTCO2P19-201ENST00000427513 598 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC000111.3-201ENST00000433478 193 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 Z99127.3-201ENST00000448158 395 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC007537.2-201ENST00000472093 511 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 RPS27AP1-201ENST00000475545 471 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC020893.1-201ENST00000502452 580 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU7-51P-201ENST00000516560 62 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC098848.2-201ENST00000588023 330 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC015813.4-201ENST00000610469 179 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 MIR6716-201ENST00000613413 80 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC068831.8-201ENST00000620171 435 ntBASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA3Q9Y5H0 AC093536.2-201ENST00000565257 1406 ntBASIC4.46□□□□□ -1.69
PCDHGA3Q9Y5H0 AC009643.2-201ENST00000603543 1448 ntBASIC4.46□□□□□ -1.69
PCDHGA3Q9Y5H0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHGA3Q9Y5H0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 Y_RNA.248-201ENST00000364501 109 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU1-82P-201ENST00000390851 165 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 Z98745.1-201ENST00000402553 494 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 MTND1P23-201ENST00000416931 372 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 EIF4EP1-201ENST00000422311 642 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RGS17P1-201ENST00000423358 553 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC004866.2-201ENST00000438285 481 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC069285.2-201ENST00000440210 275 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AL662791.1-201ENST00000441992 928 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC079168.2-201ENST00000453977 416 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RPS15AP36-201ENST00000492022 382 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL36AP41-201ENST00000493820 306 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC083829.1-201ENST00000503756 657 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 RNA5SP497-201ENST00000516081 97 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC090572.1-201ENST00000519251 160 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms