Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 STAG3L4-201ENST00000352103 530 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.217-201ENST00000364214 105 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 RNA5SP474-201ENST00000391234 90 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 MIR513C-201ENST00000401352 84 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 RNA5SP115-201ENST00000411160 107 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 POLR2KP2-201ENST00000438155 177 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 GAPDHP25-201ENST00000447061 1001 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 MRPS10P1-201ENST00000448483 130 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.641-201ENST00000459414 105 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 OR4H12P-201ENST00000556269 907 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AC127455.1-201ENST00000565496 145 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AC055872.1-201ENST00000570978 278 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AC111152.1-202ENST00000635848 339 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 TATDN2P3-201ENST00000452855 3665 ntBASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC105114.1-201ENST00000624795 1862 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-222P-201ENST00000362438 107 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.121-201ENST00000363309 113 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-318P-201ENST00000384283 103 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-429P-201ENST00000384582 108 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.563-201ENST00000384707 108 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RPS4XP3-201ENST00000398541 413 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 MIR541-201ENST00000401360 84 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU2-21P-201ENST00000410368 188 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU2-2P-201ENST00000410396 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-1064P-201ENST00000410626 104 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AL663061.1-201ENST00000416625 580 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AL357134.1-201ENST00000445848 426 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL184P-201ENST00000488308 297 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC103996.1-201ENST00000555468 102 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC091078.2-201ENST00000557145 559 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RPL29P33-201ENST00000587474 316 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RPL23AP88-201ENST00000605759 454 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU2-4P-201ENST00000606190 192 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.15-201ENST00000611544 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.16-201ENST00000613119 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.12-201ENST00000613778 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.9-201ENST00000615427 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.11-201ENST00000616345 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.2-201ENST00000616535 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.3-201ENST00000617785 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.19-201ENST00000618602 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU2-1-201ENST00000618664 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.6-201ENST00000619225 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.5-201ENST00000619465 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 U2.10-201ENST00000620268 191 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AC139769.1-204ENST00000472297 1931 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 AL731532.2-201ENST00000623542 1953 ntBASIC6.48□□□□□ -1.37
PCDHGA4Q9Y5G9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 AC016745.2-201ENST00000608834 3443 ntBASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 AL136531.3-201ENST00000624378 3658 ntBASIC6.47□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.182-201ENST00000363880 111 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms