Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 RN7SL863P-201ENST00000462370 296 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 RPL21P39-201ENST00000463605 483 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AL049714.1-201ENST00000466686 347 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC011979.1-201ENST00000472300 483 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 RPL21P93-201ENST00000480465 489 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC013828.1-201ENST00000481845 158 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC233702.1-201ENST00000482905 502 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC087190.1-201ENST00000484462 480 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC093591.1-201ENST00000491435 481 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 RPL21P129-201ENST00000491732 478 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 RPL21P16-201ENST00000495531 483 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 COX7A2P2-201ENST00000505291 250 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 HSPD1P15-201ENST00000505573 1122 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC006518.2-201ENST00000542513 940 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 BNIP3P24-201ENST00000593398 557 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC004852.3-201ENST00000614131 326 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 CYCSP41-201ENST00000616920 296 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC110079.1-202ENST00000635213 138 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 OR8B1P-202ENST00000641132 1178 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AC024341.1-201ENST00000526444 1552 ntBASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RHBDD3Q9Y3P4 AP000526.1-201ENST00000603308 1388 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RNU6-492P-201ENST00000363035 104 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 MIR217-201ENST00000384817 110 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 MIR181B1-201ENST00000385240 110 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 SNORA48.7-201ENST00000391302 135 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RNU2-25P-201ENST00000411041 191 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RNU6-575P-201ENST00000411326 105 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AL513477.1-202ENST00000417061 214 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AL353678.1-201ENST00000422735 741 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 Z93242.1-201ENST00000427102 353 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC093151.1-201ENST00000427711 313 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RPL7L1P10-201ENST00000427790 463 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 PSMA6P3-201ENST00000428242 164 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC024082.2-201ENST00000434771 238 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC006028.1-201ENST00000438379 402 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RNF2P1-201ENST00000442955 1010 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 GAPDHP27-201ENST00000447427 1020 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 USP9YP34-201ENST00000453983 808 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 SUMO2P2-201ENST00000456482 255 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RPL21P18-201ENST00000469899 480 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC109925.1-201ENST00000478069 331 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 SNORA48.10-201ENST00000516965 160 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 MTCO1P47-201ENST00000523889 1271 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC090502.2-201ENST00000549267 280 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 MIR5680-201ENST00000577577 84 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC105224.1-201ENST00000587055 421 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AP001542.2-201ENST00000593141 364 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RPAP2P1-201ENST00000603626 1168 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 RPL23AP88-201ENST00000605759 454 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 TUG1_1.1-201ENST00000610654 145 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 MIR7112-201ENST00000616126 65 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC138932.5-201ENST00000617759 563 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 MIR6075-201ENST00000620782 95 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 AC018692.3-201ENST00000623929 123 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 HPVC1-201ENST00000629899 1198 ntBASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RHBDD3Q9Y3P4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNU1-105P-201ENST00000363470 161 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNA5SP267-201ENST00000364893 126 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 SUGT1P1-201ENST00000379514 476 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 SNORA7.4-201ENST00000384249 137 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNU6-198P-201ENST00000384258 104 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 SNORD15B-201ENST00000384714 146 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNVU1-14-201ENST00000384770 164 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 U3.19-201ENST00000390893 196 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNU2-43P-201ENST00000410306 190 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNU4-47P-201ENST00000410876 114 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RNA5SP120-201ENST00000410900 112 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RN7SKP58-201ENST00000411010 305 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 RPL7P8-201ENST00000411964 730 ntBASIC2.66□□□□□ -1.98
RHBDD3Q9Y3P4 AL590383.1-201ENST00000428602 75 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms