Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6-1016P-201ENST00000516689 94 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RNA5SP34-201ENST00000516887 130 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RN7SKP260-201ENST00000516907 149 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC026470.2-201ENST00000561492 181 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 MYL12BP1-201ENST00000569826 507 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL512624.1-201ENST00000613638 469 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 FAM157A-202ENST00000615155 405 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL590099.1-201ENST00000615276 138 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL355365.1-201ENST00000616480 294 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL353662.3-201ENST00000625131 237 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC009313.2-201ENST00000417893 1941 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC010329.2-201ENST00000595195 2737 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 Z95331.1-201ENST00000623075 23112 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RPL23P2-201ENST00000320371 421 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.80-201ENST00000362996 102 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RNU6-188P-201ENST00000364207 107 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.496-201ENST00000384444 101 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RNU6-1026P-201ENST00000384465 108 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RNU6-328P-201ENST00000390887 106 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RNU6-278P-201ENST00000390945 109 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AL603908.1-201ENST00000406098 201 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 SNORA77-201ENST00000408716 125 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 HMGN1P24-201ENST00000412282 298 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC114491.1-201ENST00000416095 246 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AL591212.2-201ENST00000433923 257 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RPL7P28-201ENST00000437739 740 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 H2AFZP6-201ENST00000444403 394 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 KNOP1P3-201ENST00000446933 426 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC006967.1-201ENST00000467608 589 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC128713.1-201ENST00000471495 306 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC110794.1-201ENST00000505816 425 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 RNU6-798P-201ENST00000516912 103 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 FAM60DP-201ENST00000524174 632 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 BNIP3P16-201ENST00000589779 534 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 PSMA6P4-201ENST00000603247 718 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 AC055839.1-201ENST00000634467 498 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 TPTE2P4-201ENST00000258589 1605 ntBASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AP4E1Q9UPM8 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 ZNF734P-201ENST00000419494 1534 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 SNURFL-201ENST00000309296 343 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 RNU6-249P-201ENST00000363016 102 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 DEFB109C-201ENST00000382575 264 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 DEFB109B-201ENST00000382656 264 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AL354714.3-201ENST00000447284 493 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 snoU13.7-201ENST00000459220 104 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 snoU109.6-201ENST00000516831 118 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 RNU6-64P-201ENST00000517119 105 ntBASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.24□□□□□ -1.57
AP4E1Q9UPM8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms