Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 GNG5P1-201ENST00000255500 204 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 RPL23AP57-201ENST00000332361 466 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 SNORA7.2-201ENST00000364446 145 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 RNA5SP267-201ENST00000364893 126 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 MIR128-1-201ENST00000384921 82 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 RNU6-952P-201ENST00000391164 108 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL122016.1-201ENST00000403365 367 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 RNA5SP104-201ENST00000410989 118 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL160275.2-201ENST00000412010 394 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 HMGB1P11-201ENST00000413899 637 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL138799.3-201ENST00000438968 350 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 HMGB1P37-201ENST00000439613 609 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC069285.2-201ENST00000440210 275 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL831737.1-201ENST00000441288 271 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 PABPC1P3-201ENST00000469174 459 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 RN7SKP116-201ENST00000516902 319 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC007991.1-201ENST00000522680 631 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AP002963.1-201ENST00000530590 184 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC087752.4-201ENST00000605911 462 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 HMGN2P28-201ENST00000606102 262 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL591424.2-201ENST00000617023 128 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AC025048.6-202ENST00000627667 438 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 AL365361.1-201ENST00000566942 3481 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC9Q9UKV0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC097504.1-201ENST00000515103 2415 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 RNU5F-6P-201ENST00000362979 116 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 RNU6-335P-201ENST00000364563 113 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 RNU4-91P-201ENST00000364778 135 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 Y_RNA.505-201ENST00000384489 102 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 MIR199A2-201ENST00000385289 110 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 ELOCP18-201ENST00000434209 337 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC096638.2-201ENST00000434965 711 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 Z74696.2-201ENST00000436514 498 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 SNRPEP7-201ENST00000438350 220 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 MTND5P14-201ENST00000441481 1267 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 USP9YP29-201ENST00000445112 563 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 ST13P20-201ENST00000447996 1065 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 RN7SL585P-201ENST00000470538 280 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 RPL31P50-201ENST00000471002 296 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 RPL31P13-201ENST00000484151 370 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC079140.3-201ENST00000511111 550 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AP003385.6-201ENST00000531603 374 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC091489.2-201ENST00000566263 604 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AL355812.1-201ENST00000603215 216 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC068276.1-201ENST00000605793 379 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AP000254.1-201ENST00000609934 520 ntBASIC4.61□□□□□ -1.67
HDAC9Q9UKV0 AC015813.4-201ENST00000610469 179 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms